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Data in Brief Dec 2023Plastics are produced with a staggering array of chemical compounds, with many being known to possess hazardous properties, and others lacking comprehensive hazard data....
Plastics are produced with a staggering array of chemical compounds, with many being known to possess hazardous properties, and others lacking comprehensive hazard data. Furthermore, non-intentionally added substances can contaminate plastics at various stages of their lifecycle, resulting in recycled materials containing an unknown number of chemical compounds at unknown concentrations. While some national and regional regulations exist for permissible concentrations of hazardous chemicals in specific plastic products, less than 1 % of plastics chemicals are subject to international regulation [1]. There are currently no policies mandating transparent reporting of chemicals throughout the plastics value chain or comprehensive monitoring of chemicals in recycled materials. The dataset presented here provides the chemical analysis of 28 samples of recycled High-Density Polyethylene (HDPE) pellets obtained from various regions of the Global South, along with a reference sample of virgin HDPE. The analysis comprises both Target and Non-Targeted Screening approaches, employing Liquid Chromatography-High-Resolution Mass Spectrometry (LC-HRMS) and Gas Chromatography-High-Resolution Mass Spectrometry (GC-HRMS). In total, 491 organic compounds were detected and quantified, with an additional 170 compounds tentatively annotated. These compounds span various classes, including pesticides, pharmaceuticals, industrial chemicals, plastic additives. The results highlight the prevalence of certain chemicals, such as N-ethyl-o-Toluesulfonamide, commonly used in HDPE processing, found in high concentrations. The paper provides a dataset advancing knowledge of the complex chemical composition associated with recycled plastics.
PubMed: 37965607
DOI: 10.1016/j.dib.2023.109740 -
Sensors (Basel, Switzerland) Jul 2023This paper evaluates the potential application of Raman baselines in characterizing organic deposition. Taking the layered sediments (Stromatolite) formed by the growth...
This paper evaluates the potential application of Raman baselines in characterizing organic deposition. Taking the layered sediments (Stromatolite) formed by the growth of early life on the Earth as the research object, Raman spectroscopy is an essential means to detect deep-space extraterrestrial life. Fluorescence is the main factor that interferes with Raman spectroscopy detection, which will cause the enhancement of the Raman baseline and annihilate Raman information. The paper aims to evaluate fluorescence contained in the Raman baseline and characterize organic sedimentary structure using the Raman baseline. This study achieves spectral image fusion combined with mapping technology to obtain high spatial and spectral resolution fusion images. To clarify that the fluorescence of organic matter deposition is the main factor causing Raman baseline enhancement, 5041 Raman spectra were obtained in the scanning area of 710 μm × 710 μm, and the correlation mechanism between the gray level of the light-dark layer of the detection point and the Raman baseline was compared. The spatial distribution of carbonate minerals and organic precipitations was detected by combining mapping technology. In addition, based on the BI-IHS algorithm, the spectral image fusion of Raman fluorescence mapping and reflection micrograph, polarization micrograph, and orthogonal polarization micrograph are realized, respectively. A fusion image with high spectral resolution and high spatial resolution is obtained. The results show that the Raman baseline can be used as helpful information to characterize stromatolite organic sedimentary structure.
Topics: Algorithms; Carbonates; Organic Chemicals; Spectrum Analysis, Raman
PubMed: 37447978
DOI: 10.3390/s23136128 -
The Science of the Total Environment Sep 2023Green infrastructure drainage systems are innovative treatment units that capture and treat stormwater. Unfortunately, highly polar contaminants remain challenging to...
Green infrastructure drainage systems are innovative treatment units that capture and treat stormwater. Unfortunately, highly polar contaminants remain challenging to remove in conventional biofilters. To overcome treatment limitations, we assessed the transport and removal of stormwater vehicle-related organic contaminants with persistent, mobile, and toxic (in short: PMTs) properties, such as 1H-benzotriazole, NN'-diphenylguanidine, and hexamethoxymethylmelamine (PMT precursor), using batch experiments and continuous-flow sand columns amended with pyrogenic carbonaceous materials, like granulated activated carbon (GAC) or wheat-straw derived biochar. Our results indicated that all investigated contaminants were subjected to nonequilibrium interactions in sand-only and geomedia-amended columns, with kinetic effects upon transport. Experimental breakthrough curves could be well described by a one-site kinetic transport model assuming saturation of sorption sites, which we inferred could occur due to dissolved organic matter fouling. Furthermore, from both batch and column experiments, we found that GAC could remove contaminants significantly better than biochar with higher sorption capacity and faster sorption kinetics. Hexamethoxymethylmelamine, with the lowest organic carbon-water partition coefficient (K) and largest molecular volume among target chemicals, exhibited the lowest affinity in both carbonaceous adsorbents based on estimated sorption parameters. Results suggest that sorption of investigated PMTs was likely driven by steric and hydrophobic effects, and coulombic and other weak intermolecular forces (e.g., London-van der Waals, H-bonding). Results from extrapolating our data to a 1-m depth geomedia-amended sand filter suggested that GAC and biochar could enhance the removal of organic contaminants in biofilters and last for more than one decade. Overall, our work is the first to study treatment alternatives for NN'-diphenylguanidine and hexamethoxymethylmelamine, and contributes to better PMT contaminant removal strategies in environmental applications.
Topics: Charcoal; Guanidines; Adsorption
PubMed: 37209730
DOI: 10.1016/j.scitotenv.2023.164264 -
Heliyon Oct 2023The increase in world population growth and its resultant increase in industrial production to meet its need, have continued to raise the volume of wastewater received... (Review)
Review
The increase in world population growth and its resultant increase in industrial production to meet its need, have continued to raise the volume of wastewater received by treatment plant facilities. This has expectedly, led to an upsurge in the volume of sewage sludge and biosolids generated from wastewater treatment systems. Biosolids are best managed by application on land because of their agronomic benefits. However, this usage has been discovered to negatively affect humans and impact the environment due to the accumulation of minute concentrations of contaminants still present in the biosolid after treatment, hence the need for government regulations. This review article examined the fate and effects of pollutants, especially persistent organic pollutants (PoPs) of concern and emerging contaminants found in biosolids used for land applications, and also discussed government regulations on biosolid reuse from the perspectives of the two major regulations governing biosolid land application-the EU's Sludge Directive and USEPA's Part 503 Rule, in an attempt to draw attention to their outdated contents since enactment, as they do not currently meet the challenges of biosolid land application and thus, require a comprehensive update. Any update efforts should focus on USEPA's Part 503 Rule, which is less stringent on the allowable concentration of biosolid pollutants. Furthermore, an update should include specific regulations on new and emerging contaminants and persistent organic pollutants (PoPs) such as microplastics, pharmaceutical and personal care products (P&PCPs), surfactants, endocrine-disrupting chemicals, flame retardants, pathogens, and organic pollutants; further reduction of heavy metal standard limits, and consideration of soil phosphate-metal interactions to regulate biosolid agronomic loading rate. Future biosolid research should focus on the concentration of TCS, TCC, and emerging pharmaceuticals, as well as Microplastic transport in biosolid-amended soils, soil-plant transfer mechanism, and metabolism of PFAs in the soils; all of which will inform government policies on biosolid application on land.
PubMed: 37810801
DOI: 10.1016/j.heliyon.2023.e19788 -
Annals of Botany Oct 2023Plants often use floral displays to attract mutualists and prevent antagonist attacks. Chemical displays detectable from a distance include attractive or repellent... (Review)
Review
BACKGROUND
Plants often use floral displays to attract mutualists and prevent antagonist attacks. Chemical displays detectable from a distance include attractive or repellent floral volatile organic compounds (FVOCs). Locally, visitors perceive contact chemicals including nutrients but also deterrent or toxic constituents of pollen and nectar. The FVOC and pollen chemical composition can vary intra- and interspecifically. For certain pollinator and florivore species, responses to these compounds are studied in specific plant systems, yet we lack a synthesis of general patterns comparing these two groups and insights into potential correlations between FVOC and pollen chemodiversity.
SCOPE
We reviewed how FVOCs and non-volatile floral chemical displays, i.e. pollen nutrients and toxins, vary in composition and affect the detection by and behaviour of insect visitors. Moreover, we used meta-analyses to evaluate the detection of and responses to FVOCs by pollinators vs. florivores within the same plant genera. We also tested whether the chemodiversity of FVOCs, pollen nutrients and toxins is correlated, hence mutually informative.
KEY RESULTS
According to available data, florivores could detect more FVOCs than pollinators. Frequently tested FVOCs were often reported as pollinator-attractive and florivore-repellent. Among FVOCs tested on both visitor groups, there was a higher number of attractive than repellent compounds. FVOC and pollen toxin richness were negatively correlated, indicating trade-offs, whereas a marginal positive correlation between the amount of pollen protein and toxin richness was observed.
CONCLUSIONS
Plants face critical trade-offs, because floral chemicals mediate similar information to both mutualists and antagonists, particularly through attractive FVOCs, with fewer repellent FVOCs. Furthermore, florivores might detect more FVOCs, whose richness is correlated with the chemical richness of rewards. Chemodiversity of FVOCs is potentially informative of reward traits. To gain a better understanding of the ecological processes shaping floral chemical displays, more research is needed on floral antagonists of diverse plant species and on the role of floral chemodiversity in visitor responses.
Topics: Animals; Pollination; Flowers; Plant Nectar; Insecta; Pollen; Volatile Organic Compounds
PubMed: 37220889
DOI: 10.1093/aob/mcad064 -
Microbiology Spectrum Apr 2024Microbial reduction of organic disulfides affects the macromolecular structure and chemical reactivity of natural organic matter. Currently, the enzymatic pathways that...
Microbial reduction of organic disulfides affects the macromolecular structure and chemical reactivity of natural organic matter. Currently, the enzymatic pathways that mediate disulfide bond reduction in soil and sedimentary organic matter are poorly understood. In this study, we examined the extracellular reduction of 5,5'-dithiobis(2-nitrobenzoic acid) (DTNB) by strain MR-1. A transposon mutagenesis screen performed with resulted in the isolation of a mutant that lost ~90% of its DTNB reduction activity. Genome sequencing of the mutant strain revealed that the transposon was inserted into the gene, which encodes for an oxidoreductase involved in cytochrome maturation. Complementation of the mutant strain with the wild-type partially restored DTNB reduction activity. Because DsbD catalyzes a critical step in the assembly of multi-heme -type cytochromes, we further investigated the role of extracellular electron transfer cytochromes in organic disulfide reduction. The results indicated that mutants lacking proteins in the Mtr system were severely impaired in their ability to reduce DTNB. These findings provide new insights into extracellular organic disulfide reduction and the enzymatic pathways of organic sulfur redox cycling.Organic sulfur compounds in soils and sediments are held together by disulfide bonds. This study investigates how breaks apart extracellular organic sulfur compounds. The results show that an enzyme involved in the assembly of -type cytochromes as well as proteins in the Mtr respiratory pathway is needed for to transfer electrons from the cell surface to extracellular organic disulfides. These findings have important implications for understanding how organic sulfur decomposes in terrestrial ecosystems.
Topics: Dithionitrobenzoic Acid; Ecosystem; Oxidation-Reduction; Shewanella; Cytochromes; Sulfur; Disulfides; Sulfur Compounds
PubMed: 38415659
DOI: 10.1128/spectrum.04081-23 -
Environmental Science and Pollution... Jul 2023The European eel (Anguilla anguilla) is a critically endangered species. The impact of environmental contamination on this species has been highlighted as contributing...
The European eel (Anguilla anguilla) is a critically endangered species. The impact of environmental contamination on this species has been highlighted as contributing to the decline in recruitment. The Mar Menor hypersaline coastal lagoon (SE Spain) is one of the most productive fisheries of European eel in Europe, making it a critical habitat for species conservation. The present study aimed to provide an initial overview of the impact of organic chemical contaminants on the European eel and the potential sublethal effects of chemical pollution on pre-migrating eels in this hypersaline habitat. We investigated muscle bioaccumulation of main persistent and hazardous organic contaminants (including some current-use pesticides) and genotoxicity, neurotoxicity, and xenobiotic detoxification system responses. The findings show that lagoon eels were exposed to high levels of legacy organochlorine contaminants, recently banned pesticides (chlorpyrifos), and some emerging chemicals. Some individuals surpassed the maximum levels of CBs authorized by the European Commission for human consumption. In this species, residuals of chlorpyrifos, pendimethalin, and chlorthal dimethyl have been reported for the first time. This field study provides relevant data to stock management and human health consumption and provides the first biomarker responses in European eel under permanent hypersaline conditions. Furthermore, the high frequency of micronuclei in peripheral erythrocytes of lagoon eels indicates sublethal genotoxic effects on the organism. Overall, the European eels growing and maturing in the Mar Menor lagoon are exposed to toxic and carcinogenic chemicals. The lack of seafood safety regulations for human consumption for some legacy chemicals that were measured in high concentrations in our study requires special action. Further biomonitoring and research are recommended to protect the animal, public, and environmental health.
Topics: Humans; Animals; Anguilla; Chlorpyrifos; Europe; Seafood; Pesticides; Water Pollutants, Chemical
PubMed: 37289386
DOI: 10.1007/s11356-023-27871-9 -
Biosensors Nov 2023Electrochemical and impedimetric detection of nitrogen-containing organic compounds (NOCs) in blood, urine, sweat, and saliva is widely used in clinical diagnosis. NOC... (Review)
Review
Electrochemical and impedimetric detection of nitrogen-containing organic compounds (NOCs) in blood, urine, sweat, and saliva is widely used in clinical diagnosis. NOC detection is used to identify illnesses such as chronic kidney disease (CKD), end-stage renal disease (ESRD), cardiovascular complications, diabetes, cancer, and others. In recent years, nanomaterials have shown significant potential in the detection of NOCs using electrochemical and impedimetric sensors. This potential is due to the higher surface area, porous nature, and functional groups of nanomaterials, which can aid in improving the sensing performance with inexpensive, direct, and quick-time processing methods. In this review, we discuss nanomaterials, such as metal oxides, graphene nanostructures, and their nanocomposites, for the detection of NOCs. Notably, researchers have considered nanocomposite-based devices, such as a field effect transistor (FET) and printed electrodes, for the detection of NOCs. In this review, we emphasize the significant importance of electrochemical and impedimetric methods in the detection of NOCs, which typically show higher sensitivity and selectivity. So, these methods will open a new way to make embeddable electrodes for point-of-detection (POD) devices. These devices could be used in the next generation of non-invasive analysis for biomedical and clinical applications. This review also summarizes recent state-of-the-art technology for the development of sensors for on-site monitoring and disease diagnosis at an earlier stage.
Topics: Nitrogen; Biosensing Techniques; Nanostructures; Nanocomposites; Organic Chemicals; Graphite; Electrochemical Techniques
PubMed: 37998164
DOI: 10.3390/bios13110989 -
Environmental Science and Pollution... Jul 2023This study details the occurrence and concentrations of organic micropollutants (OMPs) in stormwater collected from a highway bridge catchment in Sweden. The prioritized...
This study details the occurrence and concentrations of organic micropollutants (OMPs) in stormwater collected from a highway bridge catchment in Sweden. The prioritized OMPs were bisphenol-A (BPA), eight alkylphenols, sixteen polycyclic aromatic hydrocarbons (PAHs), and four fractions of petroleum hydrocarbons (PHCs), along with other global parameters, namely, total organic carbon (TOC), total suspended solids (TSS), turbidity, and conductivity (EC). A Monte Carlo (MC) simulation was applied to estimate the event mean concentrations (EMC) of OMPs based on intra-event subsamples during eight rain events, and analyze the associated uncertainties. Assessing the occurrence of all OMPs in the catchment and comparing the EMC values with corresponding environmental quality standards (EQSs) revealed that BPA, octylphenol (OP), nonylphenol (NP), five carcinogenic and four non-carcinogenic PAHs, and C-C fractions of PHCs can be problematic for freshwater. On the other hand, alkylphenol ethoxylates (OPnEO and NPnEO), six low molecule weight PAHs, and lighter fractions of PHCs (C-C) do not occur at levels that are expected to pose an environmental risk. Our data analysis revealed that turbidity has a strong correlation with PAHs, PHCs, and TSS; and TOC and EC highly associated with BPA concentrations. Furthermore, the EMC error analysis showed that high uncertainty in OMP data can influence the final interpretation of EMC values. As such, some of the challenges that were experienced in the presented research yielded suggestions for future monitoring programs to obtain more reliable data acquisition and analysis.
Topics: Water Pollutants, Chemical; Environmental Monitoring; Sweden; Rain; Polycyclic Aromatic Hydrocarbons
PubMed: 37253915
DOI: 10.1007/s11356-023-27623-9 -
Clinical Chemistry and Laboratory... Oct 2023The analysis of organic acids in urine is an important part of the diagnosis of inherited metabolic disorders (IMDs), for which gas chromatography coupled with mass...
Rapid and efficient LC-MS/MS diagnosis of inherited metabolic disorders: a semi-automated workflow for analysis of organic acids, acylglycines, and acylcarnitines in urine.
OBJECTIVES
The analysis of organic acids in urine is an important part of the diagnosis of inherited metabolic disorders (IMDs), for which gas chromatography coupled with mass spectrometry is still predominantly used.
METHODS
Ultra-performance liquid chromatography-tandem mass spectrometry (LC-MS/MS) assay for urinary organic acids, acylcarnitines and acylglycines was developed and validated. Sample preparation consists only of dilution and the addition of internal standards. Raw data processing is quick and easy using selective scheduled multiple reaction monitoring mode. A robust standardised value calculation as a data transformation together with advanced automatic visualisation tools are applied for easy evaluation of complex data.
RESULTS
The developed method covers 146 biomarkers consisting of organic acids (n=99), acylglycines (n=15) and acylcarnitines (n=32) including all clinically important isomeric compounds present. Linearity with r>0.98 for 118 analytes, inter-day accuracy between 80 and 120 % and imprecision under 15 % for 120 analytes were achieved. Over 2 years, more than 800 urine samples from children tested for IMDs were analysed. The workflow was evaluated on 93 patient samples and ERNDIM External Quality Assurance samples involving a total of 34 different IMDs.
CONCLUSIONS
The established LC-MS/MS workflow offers a comprehensive analysis of a wide range of organic acids, acylcarnitines and acylglycines in urine to perform effective, rapid and sensitive semi-automated diagnosis of more than 80 IMDs.
Topics: Child; Humans; Chromatography, Liquid; Tandem Mass Spectrometry; Workflow; Metabolic Diseases; Organic Chemicals
PubMed: 37207286
DOI: 10.1515/cclm-2023-0084