-
The Science of the Total Environment Dec 2021Associations of pedunculate oak (Quercus robur L.) radial growth with satellite-based soil moisture (SM) during the intensive tree growth period over a 30-year time span...
Different tree-ring width sensitivities to satellite-based soil moisture from dry, moderate and wet pedunculate oak (Quercus robur L.) stands across a southeastern distribution margin.
Associations of pedunculate oak (Quercus robur L.) radial growth with satellite-based soil moisture (SM) during the intensive tree growth period over a 30-year time span (1980-2010) were analyzed. This study included tree-ring width (TRW) chronologies from 22 stands located in four southeastern (SE) European countries (Slovenia, Croatia, Serbia and Bulgaria), which were grouped into three wetness groups (WGs): dry (<650 mm), moderate (650-750 mm), and wet (>750 mm), following the annual sum of precipitation. High correlation strengths during the intensive growth period-late spring and early summer months (April to June) was noted, which was opposite to the trend in late summer months. Variations in detrended TRW (TRWi) sensitivity to SM were also observed among the WGs. Specifically, the TRWi chronologies from the dry and wet WGs provided a greater number of significant correlations (p < 0.01) than trees from the moderate WG did. In wetter stands, TRWi correlated more negatively in the wettest (spring) months, while the correlation was weaker in summer months; these trends were opposite to those of trees growing in drier conditions that had the strongest responses to SM. A generalized additive mixed model (GAMM) based on 38 variables indicated that the fit for SM and radial growth was as strong as the fits for other traditionally measured parameters (temperature, precipitation, and river water level) and calculated drought indices (standardized precipitation index and the Ellenberg index) and TRW. Additionally, radial growth chronologies from drier sites had stronger fits with surrounding environmental factors. In conclusion, our findings suggest that SM can potentially be used as a reliable remote sensing indicator of the soil wetness in oak forests, which affects tree productivity and radial growth patterns and provides a new opportunity in dendrochronology research on larger scales.
Topics: Climate; Droughts; Quercus; Soil; Trees
PubMed: 34392225
DOI: 10.1016/j.scitotenv.2021.149536 -
Metabolites Oct 2021Two species of oak are dominant in French forests: pedunculate oak () and sessile oak (.). Their differentiation is not straightforward but is essential to better...
Two species of oak are dominant in French forests: pedunculate oak () and sessile oak (.). Their differentiation is not straightforward but is essential to better understand their respective molecular content in order to better valorize them. Thus, to improve oak species identification, an untargeted UHPLC-HRMS/MS method associated with a two-step data treatment was developed to analyze a wide range of specialized metabolites enabling the comparison of both species of oak extracts. Pooled extracts from sessile and pedunculate oaks, composed of extracts from several trees of pure species from various origins, were compared using first the Venn diagram, as a quick way to get an initial idea of how close the extracts are, and then using a molecular network to visualize, on the one hand, the ions shared between the two species and, on the other hand, the compounds specific to one species. The molecular network showed that the two species shared common clusters mainly representative of tannins derivatives and that each species has specific molecules with similar fragmentation patterns, associated in specific clusters. This methodology was then applied to compare these two pooled extracts to unknown individuals in order to determine the species. The Venn diagram allowed for the quick presumption of the species of the individual and then the species could be assigned more precisely with the molecular network, at the level of specific clusters. This method, developed for the first time, has several interests. First, it makes it possible to discriminate the species and to correctly assign the species of unknown samples. Moreover, it gave an overview of the metabolite composition of each sample to better target oak tree utilization and valorization.
PubMed: 34677399
DOI: 10.3390/metabo11100684 -
Plant Physiology Nov 2022Drought and waterlogging impede tree growth and may even lead to tree death. Oaks, an emblematic group of tree species, have evolved a range of adaptations to cope with...
Drought and waterlogging impede tree growth and may even lead to tree death. Oaks, an emblematic group of tree species, have evolved a range of adaptations to cope with these constraints. The two most widely distributed European species, pedunculate (PO; Quercus robur L.) and sessile oak (SO; Quercus petraea Matt. Lieb), have overlapping ranges, but their respective distribution are highly constrained by local soil conditions. These contrasting ecological preferences between two closely related and frequently hybridizing species constitute a powerful model to explore the functional bases of the adaptive responses in oak. We exposed oak seedlings to waterlogging and drought, conditions typically encountered by the two species in their respective habitats, and studied changes in gene expression in roots using RNA-seq. We identified genes that change in expression between treatments differentially depending on species. These "species × environment"-responsive genes revealed adaptive molecular strategies involving adventitious and lateral root formation, aerenchyma formation in PO, and osmoregulation and ABA regulation in SO. With this experimental design, we also identified genes with different expression between species independently of water conditions imposed. Surprisingly, this category included genes with functions consistent with a role in intrinsic reproductive barriers. Finally, we compared our findings with those for a genome scan of species divergence and found that the expressional candidate genes included numerous highly differentiated genetic markers between the two species. By combining transcriptomic analysis, gene annotation, pathway analyses, as well as genome scan for genetic differentiation among species, we were able to highlight loci likely involved in adaptation of the two species to their respective ecological niches.
Topics: Quercus; Water; Soil; Trees; Gene Expression
PubMed: 36066428
DOI: 10.1093/plphys/kiac420 -
PloS One 2021Natural succession of vegetation on abandoned farmland provides opportunities for passive rewilding to re-establish native woodlands, but in Western Europe the patterns...
Natural succession of vegetation on abandoned farmland provides opportunities for passive rewilding to re-establish native woodlands, but in Western Europe the patterns and outcomes of vegetation colonisation are poorly known. We combine time series of field surveys and remote sensing (lidar and photogrammetry) to study woodland development on two farmland fields in England over 24 and 59 years respectively: the New Wilderness (2.1 ha) abandoned in 1996, and the Old Wilderness (3.9 ha) abandoned in 1961, both adjacent to ancient woodland. Woody vegetation colonisation of the New Wilderness was rapid, with 86% vegetation cover averaging 2.9 m tall after 23 years post-abandonment. The Old Wilderness had 100% woody cover averaging 13.1 m tall after 53 years, with an overstorey tree-canopy (≥ 8 m tall) covering 91%. By this stage, the structural characteristics of the Old Wilderness were approaching those of neighbouring ancient woodlands. The woody species composition of both Wildernesses differed from ancient woodland, being dominated by animal-dispersed pedunculate oak Quercus robur and berry-bearing shrubs. Tree colonisation was spatially clustered, with wind-dispersed common ash Fraxinus excelsior mostly occurring near seed sources in adjacent woodland and hedgerows, and clusters of oaks probably resulting from acorn hoarding by birds and rodents. After 24 years the density of live trees in the New Wilderness was 132/ha (57% oak), with 390/ha (52% oak) in the Old Wilderness after 59 years; deadwood accounted for 8% of tree stems in the former and 14% in the latter. Passive rewilding of these 'Wilderness' sites shows that closed-canopy woodland readily re-established on abandoned farmland close to existing woodland, it was resilient to the presence of herbivores and variable weather, and approached the height structure of older woods within approximately 50 years. This study provides valuable long-term reference data in temperate Europe, helping to inform predictions of the potential outcomes of widespread abandonment of agricultural land in this region.
Topics: Conservation of Natural Resources; Ecosystem; Forests; Trees
PubMed: 34133452
DOI: 10.1371/journal.pone.0252466 -
International Journal of Molecular... Apr 2020Adhesive secretion has a fundamental role in barnacles' survival, keeping them in an adequate position on the substrate under a variety of hydrologic regimes. It arouses...
Adhesive secretion has a fundamental role in barnacles' survival, keeping them in an adequate position on the substrate under a variety of hydrologic regimes. It arouses special interest for industrial applications, such as antifouling strategies, underwater industrial and surgical glues, and dental composites. This study was focused on the goose barnacle adhesion system, a species that lives in the Eastern Atlantic strongly exposed intertidal rocky shores and cliffs. The protein composition of cement multicomplex and cement gland was quantitatively studied using a label-free LC-MS high-throughput proteomic analysis, searched against a custom transcriptome-derived database. Overall, 11,755 peptide sequences were identified in the gland while 2880 peptide sequences were detected in the cement, clustered in 1616 and 1568 protein groups, respectively. The gland proteome was dominated by proteins of the muscle, cytoskeleton, and some uncharacterized proteins, while the cement was, for the first time, reported to be composed by nearly 50% of proteins that are not canonical cement proteins, mainly unannotated proteins, chemical cues, and protease inhibitors, among others. Bulk adhesive proteins accounted for one-third of the cement proteome, with CP52k being the most abundant. Some unannotated proteins highly expressed in the proteomes, as well as at the transcriptomic level, showed similar physicochemical properties to the known surface-coupling barnacle adhesive proteins while the function of the others remains to be discovered. New quantitative and qualitative clues are provided to understand the diversity and function of proteins in the cement of stalked barnacles, contributing to the whole adhesion model in Cirripedia.
Topics: Animals; Cell Adhesion Molecules; Exocrine Glands; Proteome; Thoracica
PubMed: 32260514
DOI: 10.3390/ijms21072524 -
Tree Physiology Jul 2021Research on wood phenology has mainly focused on reactivation of the cambium in spring. In this study we investigated if summer drought advances cessation of wood...
Research on wood phenology has mainly focused on reactivation of the cambium in spring. In this study we investigated if summer drought advances cessation of wood formation and if it has any influence on wood structure in late successional forest trees of the temperate zone. The end of xylogenesis was monitored between August and November in stands of European beech and pedunculate oak in Belgium for two consecutive years, 2017 and 2018, with the latter year having experienced an exceptional summer drought. Wood formation in oak was affected by the drought, with oak trees ceasing cambial activity and wood maturation about 3 weeks earlier in 2018 compared with 2017. Beech ceased wood formation before oak, but its wood phenology did not differ between years. Furthermore, between the 2 years, no significant difference was found in ring width, percentage of mature fibers in the late season, vessel size and density. In 2018, beech did show thinner fiber walls, whereas oak showed thicker walls. In this paper, we showed that summer drought can have an important impact on late season wood phenology xylem development. This will help to better understand forest ecosystems and improve forest models.
Topics: Droughts; Ecosystem; Seasons; Trees; Wood; Xylem
PubMed: 33616191
DOI: 10.1093/treephys/tpaa175 -
Materials (Basel, Switzerland) Jan 2022This paper describes an experimental study of the relationships between thermal diffusivity and mechanical characteristics including Brinell hardness, microhardness, and...
This paper describes an experimental study of the relationships between thermal diffusivity and mechanical characteristics including Brinell hardness, microhardness, and Young's modulus of common pine ( L.), pedunculate oak ( L.), and small-leaf lime ( Mill.) wood. A dependence of Brinell hardness and thermal diffusivity tensor components upon humidity for common pine wood is found. The results of the measurement of Brinell hardness, microhardness, Young's modulus, and main components of thermal diffusivity tensor for three perpendicular cuts are found to be correlated. It is shown that the mechanical properties correlate better with the ratio of longitude to transversal thermal diffusivity coefficients than with the respective individual absolute values. The mechanical characteristics with the highest correlation with the abovementioned ratio are found to be the ratio of Young's moduli in longitude and transversal directions. Our technique allows a comparative express assessment of wood mechanical properties by means of a contactless non-destructive measurement of its thermal properties using dynamic thermal imaging instead of laborious and material-consuming destructive mechanical tests.
PubMed: 35057348
DOI: 10.3390/ma15020632 -
Frontiers in Plant Science 2022Plants interact with a multitude of microorganisms and insects, both below- and above ground, which might influence plant metabolism. Despite this, we lack knowledge of...
Plants interact with a multitude of microorganisms and insects, both below- and above ground, which might influence plant metabolism. Despite this, we lack knowledge of the impact of natural soil communities and multiple aboveground attackers on the metabolic responses of plants, and whether plant metabolic responses to single attack can predict responses to dual attack. We used untargeted metabolic fingerprinting (gas chromatography-mass spectrometry, GC-MS) on leaves of the pedunculate oak, , to assess the metabolic response to different soil microbiomes and aboveground single and dual attack by oak powdery mildew () and the common oak aphid (). Distinct soil microbiomes were not associated with differences in the metabolic profile of oak seedling leaves. Single attacks by aphids or mildew had pronounced but different effects on the oak leaf metabolome, but we detected no difference between the metabolomes of healthy seedlings and seedlings attacked by both aphids and powdery mildew. Our findings show that aboveground attackers can have species-specific and non-additive effects on the leaf metabolome of oak. The lack of a metabolic signature detected by GC-MS upon dual attack might suggest the existence of a potential negative feedback, and highlights the importance of considering the impacts of multiple attackers to gain mechanistic insights into the ecology and evolution of species interactions and the structure of plant-associated communities, as well as for the development of sustainable strategies to control agricultural pests and diseases and plant breeding.
PubMed: 35991442
DOI: 10.3389/fpls.2022.897186 -
Journal of Biogeography Dec 2022Leaves support a large diversity of fungi, which are known to cause plant diseases, induce plant defences or influence leaf senescence and decomposition. To advance our...
AIM
Leaves support a large diversity of fungi, which are known to cause plant diseases, induce plant defences or influence leaf senescence and decomposition. To advance our understanding of how foliar fungal communities are structured and assembled, we assessed to what extent leaf flush and latitude can explain the within- and among-tree variation in foliar fungal communities.
LOCATION
A latitudinal gradient spanning . 20 degrees in latitude in Europe.
TAXA
The foliar fungal community associated with a foundation tree species, the pedunculate oak .
METHODS
We examined the main and interactive effects of leaf flush and latitude on the foliar fungal community by sampling 20 populations of the pedunculate oak across the tree's range. We used the ITS region as a target for characterization of fungal communities using DNA metabarcoding.
RESULTS
Species composition, but not species richness, differed between leaf flushes. Across the latitudinal gradient, species richness was highest in the central part of the oak's distributional range, and foliar fungal community composition shifted along the latitudinal gradient. Among fungal guilds, the relative abundance of plant pathogens and mycoparasites was lower on the first leaf flush, and the relative abundance of plant pathogens and saprotrophs decreased with latitude.
CONCLUSIONS
Changes in community composition between leaf flushes and along the latitudinal gradient were mostly a result of species turnover. Overall, our findings demonstrate that leaf flush and latitude explain 5%-22% of the small- and large-scale spatial variation in the foliar fungal community on a foundation tree within the temperate region. Using space-for-time substitution, we expect that foliar fungal community structure will change with climate warming, with an increase in the abundance of plant pathogens and mycoparasites at higher latitudes, with major consequences for plant health, species interactions and ecosystem dynamics.
PubMed: 36636040
DOI: 10.1111/jbi.14508 -
The Science of the Total Environment Dec 2022Trees in cities provide multiple ecosystem services. However, simultaneously ensuring healthy trees with high habitat diversity can be challenging in a harsh urban...
Trees in cities provide multiple ecosystem services. However, simultaneously ensuring healthy trees with high habitat diversity can be challenging in a harsh urban environment. We compared health, microhabitats, and bat activities between native (Quercus robur L.) and non-native (Quercus rubra L.) oaks growing in different urban habitats (street vs. park) in Karlsruhe, southwestern Germany. We randomly selected 167 oak trees with a diameter at breast height (DBH) >20 cm across the city from Urban Tree Registrar. We performed tree health assessment, dendrometric, and microhabitat inventory. We recorded the four-day bat activities on 45 native and non-native oaks with acoustic loggers installed on the trees. We found that non-native oaks were healthier than native oaks but provided less abundance and richness of microhabitats. Tree size (positive effect) and pruning (negative effect) strongly influence microhabitat richness and abundance. In addition, park trees hosted significantly more microhabitats than street trees. We recorded the activities of 9 bat species from 4 genera. Pipistrellus bats were more active in park trees than street trees. Long-eared bats (Plecotus) were more active near the native than non-native oaks. Bats are likely favored by microhabitats such as fork split, lightning scar, and woodpecker "flute" that are more common in less healthy trees. We conclude that non-native red oak can be planted alongside streets, where the conditions are harsher than in parks to better adapt to climatic changes and stay healthy with less maintenance. The preservation of native pedunculate oak trees, especially within parks, is paramount for urban biodiversity conservation because of their potential to provide microhabitats and supporting bats.
Topics: Animals; Trees; Quercus; Ecosystem; Chiroptera; Cities; Biodiversity
PubMed: 36089021
DOI: 10.1016/j.scitotenv.2022.158603