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Accounts of Chemical Research Nov 2020In nature, light is harvested by photoactive proteins to drive a range of biological processes, including photosynthesis, phototaxis, vision, and ultimately life....
In nature, light is harvested by photoactive proteins to drive a range of biological processes, including photosynthesis, phototaxis, vision, and ultimately life. Bacteriorhodopsin, for example, is a protein embedded within archaeal cell membranes that binds the chromophore retinal within its hydrophobic pocket. Exposure to light triggers regioselective photoisomerization of the confined retinal, which in turn initiates a cascade of conformational changes within the protein, triggering proton flux against the concentration gradient, providing the microorganisms with the energy to live. We are inspired by these functions in nature to harness light energy using synthetic photoswitches under confinement. Like retinal, synthetic photoswitches require some degree of conformational flexibility to isomerize. In nature, the conformational change associated with retinal isomerization is accommodated by the structural flexibility of the opsin host, yet it results in steric communication between the chromophore and the protein. Similarly, we strive to design systems wherein isomerization of confined photoswitches results in steric communication between a photoswitch and its confining environment. To achieve this aim, a balance must be struck between molecular crowding and conformational freedom under confinement: too much crowding prevents switching, whereas too much freedom resembles switching of isolated molecules in solution, preventing communication.In this Account, we discuss five classes of synthetic light-switchable compounds-diarylethenes, anthracenes, azobenzenes, spiropyrans, and donor-acceptor Stenhouse adducts-comparing their behaviors under confinement and in solution. The environments employed to confine these photoswitches are diverse, ranging from planar surfaces to nanosized cavities within coordination cages, nanoporous frameworks, and nanoparticle aggregates. The trends that emerge are primarily dependent on the nature of the photoswitch and not on the material used for confinement. In general, we find that photoswitches requiring less conformational freedom for switching are, as expected, more straightforward to isomerize reversibly under confinement. Because these compounds undergo only small structural changes upon isomerization, however, switching does not propagate into communication with their environment. Conversely, photoswitches that require more conformational freedom are more challenging to switch under confinement but also can influence system-wide behavior.Although we are primarily interested in the effects of geometric constraints on photoswitching under confinement, additional effects inevitably emerge when a compound is removed from solution and placed within a new, more crowded environment. For instance, we have found that compounds that convert to zwitterionic isomers upon light irradiation often experience stabilization of these forms under confinement. This effect results from the mutual stabilization of zwitterions that are brought into close proximity on surfaces or within cavities. Furthermore, photoswitches can experience preorganization under confinement, influencing the selectivity and efficiency of their photoreactions. Because intermolecular interactions arising from confinement cannot be considered independently from the effects of geometric constraints, we describe all confinement effects concurrently throughout this Account.
PubMed: 32969638
DOI: 10.1021/acs.accounts.0c00434 -
Current Biology : CB Jul 2022Diverse light-sensing organs (i.e., eyes) have evolved across animals. Interestingly, several subcellular analogs have been found in eukaryotic microbes. All of these... (Review)
Review
Diverse light-sensing organs (i.e., eyes) have evolved across animals. Interestingly, several subcellular analogs have been found in eukaryotic microbes. All of these systems have a common "recipe": a light occluding or refractory surface juxtaposed to a membrane-layer enriched in type I rhodopsins. In the fungi, several lineages have been shown to detect light using a diversity of non-homologous photo-responsive proteins. However, these systems are not associated with an eyespot-like organelle with one exception found in the zoosporic fungus Blastocladiella emersonii (Be).Be possesses both elements of this recipe: an eyespot composed of lipid-filled structures (often called the side-body complex [SBC]), co-localized with a membrane enriched with a gene-fusion protein composed of a type I (microbial) rhodopsin and guanylyl cyclase enzyme domain (CyclOp-fusion protein). Here, we identify homologous pathway components in four Chytridiomycota orders (Chytridiales, Synchytriales, Rhizophydiales, and Monoblepharidiales). To further explore the architecture of the fungal zoospore and its lipid organelles, we reviewed electron microscopy data (e.g., the works of Barr and Hartmann and Reichle and Fuller) and performed fluorescence-microscopy imaging of four CyclOp-carrying zoosporic fungal species, showing the presence of a variety of candidate eyespot-cytoskeletal ultrastructure systems. We then assessed the presence of canonical photoreceptors across the fungi and inferred that the last common fungal ancestor was able to sense light across a range of wavelengths using a variety of systems, including blue-green-light detection. Our data imply, independently of how the fungal tree of life is rooted, that the apparatus for a CyclOp-organelle light perception system was an ancestral feature of the fungi.
Topics: Animals; Blastocladiella; Chytridiomycota; Fungi; Guanylate Cyclase; Lipids; Minocycline; Rhodopsin
PubMed: 35675809
DOI: 10.1016/j.cub.2022.05.034 -
Pest Management Science Dec 2019Many insects, especially nocturnal insects, exhibit positive phototaxis to artificial lights. Light traps are currently used to monitor and manage insect pest... (Review)
Review
Many insects, especially nocturnal insects, exhibit positive phototaxis to artificial lights. Light traps are currently used to monitor and manage insect pest populations, and play a crucial role in physical pest control. Efficient use of light traps to attract target insect pests is an important topic in the application of integrated pest management (IPM). Phototactic responses of insects vary among species, light characteristics and the physiological status of the insects. In addition, light can cause several biological responses, including biochemical, physiological, molecular and fitness changes in insects. In this review, we discuss several hypotheses on insect phototaxis, factors affecting insect phototaxis, insect-sensitive wavelengths, biological responses of insects to light, and countermeasures for conserving beneficial insects and increasing the effect of trapping. In addition, we provide information on the different sensitivities to wavelengths causing positive phototactic behavior in > 70 insect pest and beneficial insect species. The use of advanced light traps equipped with superior light sources, such as light-emitting diodes (LEDs), will make physical pest control in IPM more efficient. © 2019 Society of Chemical Industry.
Topics: Animals; Insect Control; Insecta; Phototaxis
PubMed: 31251458
DOI: 10.1002/ps.5536 -
Biomaterials Science Nov 2023Over the past decade, researchers have proposed a new class of drug delivery systems, bio-hybrid micro-robots, designed with a variety of living cell-driven micro-robots... (Review)
Review
Over the past decade, researchers have proposed a new class of drug delivery systems, bio-hybrid micro-robots, designed with a variety of living cell-driven micro-robots that utilize the unique mobility of natural organisms (bacteria, cells, exosomes, .) to transport effective drugs. Microalgae are considered potential drug delivery carriers. Recent studies have shown that microalga-based drug delivery systems exhibit excellent biocompatibility. In addition, microalgae have a large surfactant area, phototaxis, oxygen production, and other characteristics, so they are used as a carrier for the treatment of bacterial infections, cancer, . This review summarizes the modification of microalgae including click chemistry and electrostatic adsorption, and can improve the drug loading efficiency through dehydration and hydration strategies. The prepared microalgal drug delivery system can be targeted to different organs by different dosing methods or using external forces. Finally, it summarizes its antibacterial (gastritis, periodontitis, skin wound inflammation, .) and antitumor applications.
Topics: Humans; Microalgae; Drug Delivery Systems; Drug Carriers; Neoplasms; Surface-Active Agents
PubMed: 37877241
DOI: 10.1039/d3bm01095c -
Trends in Parasitology Dec 2023With growing human populations living along freshwater shores and marine coastlines, aquatic ecosystems are experiencing rising levels of light pollution. Through its... (Review)
Review
With growing human populations living along freshwater shores and marine coastlines, aquatic ecosystems are experiencing rising levels of light pollution. Through its effects on hosts and parasites, anthropogenic light at night can disrupt host-parasite interactions evolved under a normal photoperiod. Yet its impact on aquatic parasites has been ignored to date. Here, I discuss the direct effects of light on the physiology and behaviour of parasite infective stages and their hosts. I argue that night-time lights can change the spatiotemporal dynamics of infection risk and drive the rapid evolution of parasites. I then highlight knowledge gaps and how impacts on parasitic diseases should be incorporated into the design of measures aimed at mitigating the impact of anthropogenic light on wildlife.
Topics: Animals; Humans; Host-Parasite Interactions; Ecosystem; Light Pollution; Parasites; Animals, Wild
PubMed: 37722935
DOI: 10.1016/j.pt.2023.08.013 -
The Science of the Total Environment Jan 2023As an emerging green wastewater treatment technology, the microalgal-bacterial granular sludge (MBGS) process has attracted increasing interest under the current...
As an emerging green wastewater treatment technology, the microalgal-bacterial granular sludge (MBGS) process has attracted increasing interest under the current situation of global climate change. However, little information is available for its performance in treating municipal wastewater under outdoor conditions. Thus, this study evaluated the behaviors of MBGS for treating simulated and real municipal wastewater under natural diel conditions. The results showed that a significant accumulation of oxygen bubbles during daily operation led to the auto-floating of the conventional settable MBGS. The removal of organics was relatively stable during day-night cycles, while the removals of total nitrogen and total phosphorus were dependent on the saturated oxygen concentration over 10 mg/L in MBGS system. Furthermore, oxygen bubbles generated by photosynthesis of microalgae (Scenedesmaceae and Cyanobacteria) due to microalgae phototaxis were found to be attached onto the surface of granules, causing the auto-flotation of MBGS. The formation process of the auto-floating oxygenic MBGS was clarified and further analysis suggested that the non-aerated settable MBGS would be able to auto-float at an average outdoor light intensity of 140 μ mol/m/s. Overall, the auto-floating oxygenic MBGS process was demonstrated to be feasible for real municipal wastewater treatment, even under rainy and cloudy days, advancing the knowledge and adding theoretical basis for its further applications.
Topics: Microalgae; Sewage; Wastewater; Oxygen; Phosphorus; Nitrogen; Bioreactors
PubMed: 36191702
DOI: 10.1016/j.scitotenv.2022.159175 -
Chemical Society Reviews Oct 2019The recent advances in the micro/nanomotor field have shown great progress in the propulsion of such devices by fuel-free mechanisms. Light, as an abundant and natural... (Review)
Review
The recent advances in the micro/nanomotor field have shown great progress in the propulsion of such devices by fuel-free mechanisms. Light, as an abundant and natural source, has been demonstrated to be a promising external field to wirelessly induce the motion of these tiny micro/nanomachines, without the need of any toxic fuel or complex system set-up. This tutorial review covers the most representative examples of light-driven micro/nanomotors developed so far, which self-propelled exclusively under fuel-free conditions. Their different swimming behaviors triggered by light stimuli, divided into four main categories (schooling, phototaxis, gravitaxis and directional motion), are discussed along with their similarities with the motion modes of microorganisms. Moreover, the main parameters that influence the motion of light-driven photocatalytic-based micro/nanomotors as well as alternative strategies to develop more efficient systems are also discussed.
Topics: Biomimetic Materials; Catalysis; Light; Nanostructures; Nanotechnology; Solar Energy
PubMed: 31368460
DOI: 10.1039/c9cs00090a -
Applied and Environmental Microbiology May 2022Phototrophic biofilms in most environments experience major changes in light levels throughout a diel cycle. Phototaxis can be a useful strategy for optimizing light...
Phototrophic biofilms in most environments experience major changes in light levels throughout a diel cycle. Phototaxis can be a useful strategy for optimizing light exposure under these conditions, but little is known about its role in cyanobacteria from thermal springs. We examined two closely related isolates ( OS-A dominates at 60 to 65°C and OS-B' at 50 to 55°C) from outflows of Octopus Spring in Yellowstone National Park. Both isolates exhibited phototaxis and photokinesis in white light, but with differences in speed and motility bias. OS-B' exhibited phototaxis toward UVA, blue, green, and red wavelengths, while OS-A primarily exhibited phototaxis toward red and green. OS-A also exhibited negative phototaxis under certain conditions. The repertoires of photoreceptors and signal transduction elements in both isolates were quite different from those characterized in other unicellular cyanobacteria. These differences in the photoresponses between OS-A and OS-B' in conjunction with observations indicate that phototactic strategies may be quite versatile and finely tuned to the light and local environment. Optimizing light absorption is of paramount importance to photosynthetic organisms. Some photosynthetic microbes have evolved a sophisticated process called phototaxis to move toward or away from a light source. In many hot springs in Yellowstone National Park, cyanobacteria thrive in thick, laminated biofilms or microbial mats, where small movements can result in large changes in light exposure. We quantified the light-dependent motility behaviors in isolates representing two of the most abundant and closely related cyanobacterial species from these springs. We found that they exhibited unexpected differences in their speed, directionality, and responses to different intensities or qualities of light. An examination of their genomes revealed several variations from well-studied phototaxis-related genes. Studying these recently isolated cyanobacteria reveals that diverse phototactic strategies can exist even among close relatives in the same environment. It also provides insights into the importance of phototaxis for growth and survival in microbial biofilm communities.
Topics: Biofilms; Hot Springs; Photosynthesis; Phototaxis; Synechococcus
PubMed: 35499327
DOI: 10.1128/aem.00196-22 -
Frontiers in Cellular Neuroscience 2021Cation and anion channelrhodopsins (CCRs and ACRs, respectively) from phototactic algae have become widely used as genetically encoded molecular tools to control cell... (Review)
Review
Cation and anion channelrhodopsins (CCRs and ACRs, respectively) from phototactic algae have become widely used as genetically encoded molecular tools to control cell membrane potential with light. Recent advances in polynucleotide sequencing, especially in environmental samples, have led to identification of hundreds of channelrhodopsin homologs in many phylogenetic lineages, including non-photosynthetic protists. Only a few CCRs and ACRs have been characterized in detail, but there are indications that ion channel function has evolved within the rhodopsin superfamily by convergent routes. The diversity of channelrhodopsins provides an exceptional platform for the study of structure-function evolution in membrane proteins. Here we review the current state of channelrhodopsin research and outline perspectives for its further development.
PubMed: 35140589
DOI: 10.3389/fncel.2021.800313 -
Plants (Basel, Switzerland) Jun 2021Eukaryotic microalgae have been classified into several biological divisions and have evolutionarily acquired diverse morphologies, metabolisms, and life cycles. They... (Review)
Review
Eukaryotic microalgae have been classified into several biological divisions and have evolutionarily acquired diverse morphologies, metabolisms, and life cycles. They are naturally exposed to environmental stresses that cause oxidative damage due to reactive oxygen species accumulation. To cope with environmental stresses, microalgae contain various antioxidants, including carotenoids, ascorbate (AsA), and glutathione (GSH). Carotenoids are hydrophobic pigments required for light harvesting, photoprotection, and phototaxis. AsA constitutes the AsA-GSH cycle together with GSH and is responsible for photooxidative stress defense. GSH contributes not only to ROS scavenging, but also to heavy metal detoxification and thiol-based redox regulation. The evolutionary diversity of microalgae influences the composition and biosynthetic pathways of these antioxidants. For example, α-carotene and its derivatives are specific to Chlorophyta, whereas diadinoxanthin and fucoxanthin are found in Heterokontophyta, Haptophyta, and Dinophyta. It has been suggested that AsA is biosynthesized via the plant pathway in Chlorophyta and Rhodophyta and via the pathway in Euglenophyta, Heterokontophyta, and Haptophyta. The GSH biosynthetic pathway is conserved in all biological kingdoms; however, Euglenophyta are able to synthesize an additional thiol antioxidant, trypanothione, using GSH as the substrate. In the present study, we reviewed and discussed the diversity of microalgal antioxidants, including recent findings.
PubMed: 34205386
DOI: 10.3390/plants10061250