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PloS One 2022The blood fluke Cardicola forsteri (Trematoda: Aporocotylidae) is a pathogen of ranched bluefin tuna in Japan and Australia. Genomics of Cardicola spp. have thus far...
The blood fluke Cardicola forsteri (Trematoda: Aporocotylidae) is a pathogen of ranched bluefin tuna in Japan and Australia. Genomics of Cardicola spp. have thus far been limited to molecular phylogenetics of select gene sequences. In this study, sequencing of the C. forsteri genome was performed using Illumina short-read and Oxford Nanopore long-read technologies. The sequences were assembled de novo using a hybrid of short and long reads, which produced a high-quality contig-level assembly (N50 > 430 kb and L50 = 138). The assembly was also relatively complete and unfragmented, comprising 66% and 7.2% complete and fragmented metazoan Benchmarking Universal Single-Copy Orthologs (BUSCOs), respectively. A large portion (> 55%) of the genome was made up of intergenic repetitive elements, primarily long interspersed nuclear elements (LINEs), while protein-coding regions cover > 6%. Gene prediction identified 8,564 hypothetical polypeptides, > 77% of which are homologous to published sequences of other species. The identification of select putative proteins, including cathepsins, calpains, tetraspanins, and glycosyltransferases is discussed. This is the first genome assembly of any aporocotylid, a major step toward understanding of the biology of this family of fish blood flukes and their interactions within hosts.
Topics: Animals; Cathepsins; Fish Diseases; Glycosyltransferases; Schistosoma; Schistosomatidae; Tuna
PubMed: 36240154
DOI: 10.1371/journal.pone.0276287 -
Journal of Helminthology Jan 2022Pseudosuccinea columella is considered invasive and has become an important intermediate host of both Fasciola species in many regions of the world. This systematic... (Review)
Review
Pseudosuccinea columella is considered invasive and has become an important intermediate host of both Fasciola species in many regions of the world. This systematic review assessed the geographical distribution of P. columella, and its implications in the transmission of Fasciola hepatica and Fasciola gigantica, globally. A literature search was conducted on Google Scholar, JSTOR and PubMed databases using Boolean operators in combination with predetermined search terms for thematic analysis. Results show that P. columella has been documented in 22 countries from Europe (3), Africa (8), Oceania (2), North America (3) and South America (6). Furthermore, this snail species has shown to adapt to and inhabit a vast array of freshwater bodies including thermal lakes and ditches with acidic soils. Studies showed that P. columella transmits F. hepatica, with natural and experimental infections documented in sub-Saharan Africa, Europe, South America and North America. Experimental infection studies in Cuba showed the presence of P. columella populations resistant to F. hepatica infection. Furthermore, some populations of this invasive snail collected from F. hepatica endemic locations in Brazil, Venezuela, Australia, South Africa, Colombia and Argentina were found without Fasciola infection. As a result, the role played by this snail in the transmission of Fasciola spp. in these endemic areas is still uncertain. Therefore, further studies to detect natural infections are needed in regions/countries where the snail is deemed invasive to better understand the veterinary and public health importance of this snail species in Fasciola-endemic areas and determine the global dispersion of resistant populations of P. columella.
Topics: Animals; Brazil; Fasciola; Fasciola hepatica; Fascioliasis; Fasciolidae; Geography; Snails; South Africa
PubMed: 34991739
DOI: 10.1017/S0022149X21000717 -
Scientific Reports Nov 2023Microturbellarians are abundant and ubiquitous members of marine meiofaunal communities around the world. Because of their small body size, these microscopic animals are...
Microturbellarians are abundant and ubiquitous members of marine meiofaunal communities around the world. Because of their small body size, these microscopic animals are rarely considered as hosts for parasitic organisms. Indeed, many protists, both free-living and parasitic ones, equal or surpass meiofaunal animals in size. Despite several anecdotal records of "gregarines", "sporozoans", and "apicomplexans" parasitizing microturbellarians in the literature-some of them dating back to the nineteenth century-these single-celled parasites have never been identified and characterized. More recently, the sequencing of eukaryotic microbiomes in microscopic invertebrates have revealed a hidden diversity of protist parasites infecting microturbellarians and other meiofaunal animals. Here we show that apicomplexans isolated from twelve taxonomically diverse rhabdocoel taxa and one species of proseriate collected in four geographically distinct areas around the Pacific Ocean (Okinawa, Hokkaido, and British Columbia) and the Caribbean Sea (Curaçao) all belong to the apicomplexan genus Rhytidocystis. Based on comprehensive molecular phylogenies of Rhabdocoela and Proseriata inferred from both 18S and 28S rDNA sequences, as well as a molecular phylogeny of Marosporida inferred from 18S rDNA sequences, we determine the phylogenetic positions of the microturbellarian hosts and their parasites. Multiple lines of evidence, including morphological and molecular data, show that at least nine new species of Rhytidocystis infect the microturbellarian hosts collected in this study, more than doubling the number of previously recognized species of Rhytidocystis, all of which infect polychaete hosts. A cophylogenetic analysis examining patterns of phylosymbiosis between hosts and parasites suggests a complex picture of overall incongruence between host and parasite phylogenies, and varying degrees of geographic signals and taxon specificity.
Topics: Animals; Platyhelminths; Phylogeny; Parasites; DNA, Ribosomal; Apicomplexa
PubMed: 38030717
DOI: 10.1038/s41598-023-48233-y -
International Journal For Parasitology Dec 2021Trematodes are the richest class of platyhelminths in the marine environment, infecting all classes of marine vertebrates as sexual adults and many phyla of marine... (Review)
Review
Trematodes are the richest class of platyhelminths in the marine environment, infecting all classes of marine vertebrates as sexual adults and many phyla of marine invertebrates as part of their life cycles. Despite the cryptic nature of their existence (almost all marine trematodes are internal parasites), they have been the focus of study for almost 250 years, with the first species described in 1774. Here we review progress in the study of the "biodiversity" of these parasites, contrasting the progress made in the last 50 years (post-1971) to that in the almost 200 years before it (pre-1972). We consider an understanding of biodiversity to require knowledge of the species present in the system, an understanding of their evolutionary relationships (which informs higher classification), and, specifically for trematodes, an understanding of their complex life cycles. The fauna is now large, comprising well over 5,000 species. Although species description continues, we see evidence of a slow-down in all aspects of discovery. There has been only one completely new family identified since 1984 and the proposal of new genera is in decline as is the description of new species, especially for those of tetrapods. However, the extent to which this slow-down reflects an approach to the richness asymptote is made uncertain by changes in the field; reduced effort and difficulty of study may be important components of the effect. Regardless of how close we are to a complete description of the fauna, we infer that the outline is well-understood although the details are not. Adoption of molecular methodologies over the last 40 years have complemented morphometric analyses to facilitate objective recognition of species; however, despite these objective data, there is still inconsistency between authors on species delimitation. Molecular methodologies have also completely revolutionised inference of relationships at all levels, from within genera to between orders, and underpinned elucidation of novel life cycles. We expect the next 50 years to produce further dividends from technological innovations. The backdrop to the field will be global environmental concerns and the growing problem of funding for basic biodiversity studies.
Topics: Animals; Biodiversity; Biological Evolution; Life Cycle Stages; Platyhelminths; Trematoda
PubMed: 34757087
DOI: 10.1016/j.ijpara.2021.09.002 -
BMC Biology Nov 2023Unlike most free-living platyhelminths, catenulids, the sister group to all remaining flatworms, do not have eyes. Instead, the most prominent sensory structures in...
BACKGROUND
Unlike most free-living platyhelminths, catenulids, the sister group to all remaining flatworms, do not have eyes. Instead, the most prominent sensory structures in their heads are statocysts or sensory pits. The latter, found in the family Stenostomidae, are concave depressions located laterally on the head that represent one of the taxonomically important traits of the family. In the past, the sensory pits of flatworms have been homologized with the cephalic organs of nemerteans, a clade that occupies a sister position to platyhelminths in some recent phylogenies. To test for this homology, we studied morphology and gene expression in the sensory pits of the catenulid Stenostomum brevipharyngium.
RESULTS
We used confocal and electron microscopy to investigate the detailed morphology of the sensory pits, as well as their formation during regeneration and asexual reproduction. The most prevalent cell type within the organ is epidermally-derived neuron-like cells that have cell bodies embedded deeply in the brain lobes and long neurite-like processes extending to the bottom of the pit. Those elongated processes are adorned with extensive microvillar projections that fill up the cavity of the pit, but cilia are not associated with the sensory pit. We also studied the expression patterns of some of the transcription factors expressed in the nemertean cephalic organs during the development of the pits. Only a single gene, pax4/6, is expressed in both the cerebral organs of nemerteans and sensory pits of S. brevipharyngium, challenging the idea of their deep homology.
CONCLUSIONS
Since there is no morphological or molecular correspondence between the sensory pits of Stenostomum and the cerebral organs of nemerteans, we reject their homology. Interestingly, the major cell type contributing to the sensory pits of stenostomids shows ultrastructural similarities to the rhabdomeric photoreceptors of other flatworms and expresses ortholog of the gene pax4/6, the pan-bilaterian master regulator of eye development. We suggest that the sensory pits of stenostomids might have evolved from the ancestral rhabdomeric photoreceptors that lost their photosensitivity and evolved secondary function. The mapping of head sensory structures on plathelminth phylogeny indicates that sensory pit-like organs evolved many times independently in flatworms.
Topics: Animals; Platyhelminths; Phylogeny; Transcription Factors; Reproduction, Asexual; Brain
PubMed: 37993917
DOI: 10.1186/s12915-023-01768-y -
Acta Tropica Jul 2022Schistosomes are blood-dwelling parasites that are constantly exposed to high-level oxidative stress arising from parasite-intrinsic and host defense mechanisms. To...
Schistosomes are blood-dwelling parasites that are constantly exposed to high-level oxidative stress arising from parasite-intrinsic and host defense mechanisms. To survive in their hosts, schistosomes require an antioxidant system to minimize with oxidative stress. Several schistosome antioxidant enzymes have been identified and have been suggested to play indispensable antioxidant roles for the parasite. In addition to antioxidant enzymes, non-enzymatic antioxidants including small molecules, peptides, and proteins have been identified and characterized. Neuroglobin (Ngb), a nervous system-specific heme-binding protein, has been classified as a non-enzymatic antioxidant and is capable of scavenging a variety of free radical species. The antioxidant activity of Ngb has been well-studied in humans. Ngb is involved in cellular oxygen homeostasis and reactive oxygen/nitrogen scavenging in the central and peripheral nervous systems, but its functions in schistosome parasites have not yet been characterized. In this study, we aimed to characterize the molecular properties and functions of Schistosoma mekongi Ngb (SmeNgb) using bioinformatic, biochemical, and molecular biology approaches. The amino acid sequence of Ngb was highly conserved among schistosomes as well as closely related trematodes. SmeNgb was abundantly localized in the gastrodermis, vitelline, and ovary of adult female S. mekongi worms as well as in the tegument of adult male worms. Assessment of antioxidant activity demonstrated that recombinant SmeNgb had Fe chelating and hydrogen peroxide scavenging activities. Intriguingly, siRNA silencing of SmeNgb gene expression resulted in tegument pathology. Understanding the properties and functions of SmNgb will help in future development of effective treatments and vaccines against S. mekongi, other schistosome parasites, and other platyhelminths.
Topics: Animals; Antioxidants; Female; Male; Neuroglobin; Oxidative Stress; Oxygen; Schistosoma
PubMed: 35364046
DOI: 10.1016/j.actatropica.2022.106433 -
Molecular and Biochemical Parasitology Dec 2019ATP-Binding Cassette (ABC) transporters are proteins that actively mediate the transport of a wide variety of molecules, including drugs. Thus, in parasitology, ABC...
ATP-Binding Cassette (ABC) transporters are proteins that actively mediate the transport of a wide variety of molecules, including drugs. Thus, in parasitology, ABC transporters have gained attention as potential targets for therapeutic drugs. Among the parasitic Platyhelminthes, ABC transporters have been identified and classified in a few species of Trematoda and Cestoda but not in Monogenea. Monogeneans are mainly ectoparasites of marine and freshwater fish, although they can also be found on other aquatic organisms. Severe epizootics caused by monogeneans have been reported around the world, mainly in confined and/or overcrowded fish. The purpose of this study was to identify the ABC transporters in four species of monogeneans (Gyrodactylus salaris, Protopolystoma xenopodis, Eudiplozoon nipponicum and Neobenedenia melleni) for which genomic resources are publicly available. For comparative purposes, ABC transporters were also identified in endoparasitic (Schistosoma mansoni and Echinococcus granulosus) and free-living (Macrostomun lignano and Schmidtea mediterranea) platyhelminths. Thirty-two putative ABC transporters were identified in the genome of G. salaris, 40 in the genome of P. xenopodis, 46 in the transcriptome of E. nipponicum and 9 in a rather limited ESTs set available for N. melleni. Of the eight ABC subfamilies (A-H) known in metazoans, subfamily H was the only one not found in any monogenean species. In contrast, ABCC was the best represented subfamily. Phylogenetic analyses showed a few cases of one-to-one orthologous relationships, which agree with results from other metazoan species. We found some monogenean ABC members related to subfamilies B, C and G involved in drug resistance in humans. This information may be useful for future functional studies on ABC transporters in monogeneans.
Topics: ATP-Binding Cassette Transporters; Animals; Genome, Helminth; Genomics; Phylogeny; Platyhelminths; Trematoda
PubMed: 31715209
DOI: 10.1016/j.molbiopara.2019.111234 -
Parasites & Vectors Dec 2022Glutamate carboxypeptidase 2 (GCP2) belongs to the M28B metalloprotease subfamily encompassing a variety of zinc-dependent exopeptidases that can be found in many...
BACKGROUND
Glutamate carboxypeptidase 2 (GCP2) belongs to the M28B metalloprotease subfamily encompassing a variety of zinc-dependent exopeptidases that can be found in many eukaryotes, including unicellular organisms. Limited information exists on the physiological functions of GCP2 orthologs in mammalian tissues outside of the brain and intestine, and such data are completely absent for non-mammalian species. Here, we investigate GCP2 orthologs found in trematodes, not only as putative instrumental molecules for defining their basal function(s) but also as drug targets.
METHODS
Identified genes encoding M28B proteases Schistosoma mansoni and Fasciola hepatica genomes were analyzed and annotated. Homology modeling was used to create three-dimensional models of SmM28B and FhM28B proteins using published X-ray structures as the template. For S. mansoni, RT-qPCR was used to evaluate gene expression profiles, and, by RNAi, we exploited the possible impact of knockdown on the viability of worms. Enzymes from both parasite species were cloned for recombinant expression. Polyclonal antibodies raised against purified recombinant enzymes and RNA probes were used for localization studies in both parasite species.
RESULTS
Single genes encoding M28B metalloproteases were identified in the genomes of S. mansoni and F. hepatica. Homology models revealed the conserved three-dimensional fold as well as the organization of the di-zinc active site. Putative peptidase activities of purified recombinant proteins were assayed using peptidic libraries, yet no specific substrate was identified, pointing towards the likely stringent substrate specificity of the enzymes. The orthologs were found to be localized in reproductive, digestive, nervous, and sensory organs as well as parenchymal cells. Knockdown of gene expression by RNAi silencing revealed that the genes studied were non-essential for trematode survival under laboratory conditions, reflecting similar findings for GCP2 KO mice.
CONCLUSIONS
Our study offers the first insight to our knowledge into M28B protease orthologs found in trematodes. Conservation of their three-dimensional structure, as well as tissue expression pattern, suggests that trematode GCP2 orthologs may have functions similar to their mammalian counterparts and can thus serve as valuable models for future studies aimed at clarifying the physiological role(s) of GCP2 and related subfamily proteases.
Topics: Animals; Mice; Trematoda; Fasciola hepatica; Schistosoma mansoni; Peptide Hydrolases; Mammals
PubMed: 36539882
DOI: 10.1186/s13071-022-05556-5 -
Nature Aug 2019
Topics: Animals; Platyhelminths; Regeneration; Stem Cells; Transforming Growth Factor beta
PubMed: 31444489
DOI: 10.1038/d41586-019-02376-z -
Parasite (Paris, France) 2023Twenty-nine dactylogyrid species were reported from teleosts collected during a survey of the parasites of fishes of Moreton Bay, Queensland, Australia, in 2016. Two new...
Species of Dactylogyridae (Platyhelminthes: Monogenoidea) infecting marine fishes of Moreton Bay, Queensland, Australia, with proposals of Pleuronectitrema n. gen. and Ecnomotrema n. gen. and descriptions of 13 new species.
Twenty-nine dactylogyrid species were reported from teleosts collected during a survey of the parasites of fishes of Moreton Bay, Queensland, Australia, in 2016. Two new genera, Ecnomotrema n. gen. and Pleuronectitrema n. gen., were proposed, and 13 new species were illustrated and described: Atherinicus difficilis n. sp., Diversohamulus similis n. sp., and Ecnomotrema cetiosum n. sp. from Atherinomorus vaigiensis; Haliotrema apiculum n. sp. from Pempheris schwenkii; Haliotrema tugulduriforme n. sp. from Scarus ghobban; Lethrinitrema australiense n. sp., and Lethrinitrema lituus n. sp. from Lethrinus nebulosus; Tetrancistrum siganioides n. sp. from Siganus fuscescens; Ligophorus bostrychus n. sp. from Planiliza subviridis; Neohaliotrema gemmula n. sp. from Abudefduf vaigiensis; Neohaliotrema moretonense n. sp. from Ab. vaigiensis and Ab. bengalensis; and Pleuronectitrema spirula n. sp. from Pseudorhombus arsius (all from Moreton Bay); Pleuronectitrema kuwaitense Kritsky & Sey n. sp. was described from specimens collected from P. arsius in Kuwait during 1996. Ten new host records were recorded: Chauhanellus duriensis Lim, 1994 and Hamatopeduncularia thalassini Bychowsky & Nagibina, 1969 from Pararius proximus; Diplectanotrema sp. 1 and sp. 2 from Sillago maculata and Goniistius vestitus, respectively; Diversohamulus tricuspidatus Bychowsky & Nagibina, 1969 from At. vaigiensis; Hal. cf. dempsteri (Mizelle & Price, 1964) Young, 1968 from Prionurus microlepidotus; Hal. spirale Yamaguti, 1968 from Upeneus tragula; Ligophorus kaohsianghsieni (Gussev, 1962) Gussev, 1985 from Planiliza subviridis; and Neohaliotrema malayense Lim & Gibson, 2010 from Ab. bengalensis and Ab. whitleyi. Twenty-five new faunal records for Moreton Bay were recorded, including the new species listed above and C. duriensis, Diplectanotrema sp. 1 and sp. 2, Diversohamulus tricuspidatus Bychowsky & Nagibina, 1969, Glyphidohaptor phractophallus Kritsky, Galli, & Yang, 2007, Hal. cf. dempsteri, Hal. johnstoni Bychowsky & Nagibina, 1970, Hal. spirale, Yamaguti, 1968 Hamatopeduncularia thalassini Bychowsky & Nagibina, 1969, Lethrinitrema nebulosum Sun, Li, & Yang, 2014, Ligophorus kaohsianghsieni (Gussev, 1962) Gussev, 1985, Ligophorus parvicopulatrix Soo & Lim, 2012, and Neohaliotrema malayense Lim & Gibson, 2010. Three new combinations were proposed: Hal. spariense Roubal, 1981 as Euryhaliotrema spariense (Roubal, 1981) n. comb.; and Hal. arsiosa Venkatanarasaiah, 1984 and Hal. youngi Venkatanarasaiah, 1984 as Pleuronectitrema arsiosa (Venkatanarasaiah, 1984) n. comb. and Pleuronectitrema youngi (Venkatanarasaiah, 1984) n. comb., respectively; Haliotrema sp. of Zhang is transferred to Pleuronectitrema as Pleuronectitrema sp. Hal. ctenochaeti Yamaguti, 1968 was replaced with Hal. asymphylum n. nom. to remove it from homonymy with Hal. ctenochaeti Young, 1968. Pseudohaliotrematoides zancli Yamaguti, 1968 was transferred to Haliotrema as Haliotrema hawaiiense n. nom. Hal. zancli Yamaguti, 1968 was considered a junior subjective synonym of Hal. dempsteri.
Topics: Animals; Queensland; Bays; Platyhelminths; Trematoda; Australia; Fishes; Smegmamorpha
PubMed: 38117271
DOI: 10.1051/parasite/2023053