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Chemistry and Physics of Lipids Nov 2008Sponges are sessile suspension-feeding organisms whose internal phylogenetic relationships are still the subject of intense debate. Sterols may have the potential to be...
Sponges are sessile suspension-feeding organisms whose internal phylogenetic relationships are still the subject of intense debate. Sterols may have the potential to be used as independent markers to test phylogenetic hypotheses. Twenty representative specimens of calcareous sponges (class Calcarea, phylum Porifera) with a broad coverage within both subclasses Calcinea and Calcaronea were analysed for their sterol content. Two major pseudohomologous series were found, accompanied by some additional sterols. The first series encompassing conventional C(27) to C(29)Delta(5,7,22) sterols represented the major sterols, with ergosterol (ergosta-5,7,22-trien-3beta-ol, C(28)Delta(5,7,22)) being most prominent in many species. The second series consisted of unusual C(27) to C(29)Delta(5,7,9(11),22) sterols. Cholesterol occurred sporadically, mostly in trace amounts. The sterol patterns did not resolve intraclass phylogenetic relationships, namely the distinction between the subclasses, Calcinea and Calcaronea. This pointed towards major calcarean lipid traits being established prior to the separation of subclasses. Furthermore, calcarean sterol patterns clearly differ from those found in Hexactinellida, whereas partial overlap occurred with some Demospongiae. Hence, sterols only partly reflect the phylogenetic separation of Calcarea from both of the other poriferan classes that was proposed by recent molecular work and fatty acid analyses.
Topics: Animals; Ergosterol; Phylogeny; Porifera; Sterols
PubMed: 18671957
DOI: 10.1016/j.chemphyslip.2008.07.001 -
Zootaxa Nov 2016This paper focus on the biodiversity assessment of Australian inland water. Checklists of Australian Spongillida are also provided with biogeographic notes together with...
This paper focus on the biodiversity assessment of Australian inland water. Checklists of Australian Spongillida are also provided with biogeographic notes together with the geographic range of all species of freshwater sponges in Australia. New discoveries on freshwater sponges are reported from ephemeral freshwater habitats in Kakadu National Park (Australia Northern Territory). Morphological analyses show that the sponges belong to Radiospongilla and Pectispongilla in the family Spongillidae. Radiospongilla cfr. philippinensis shows a single layer of radial gemmuloscleres and the absence of tangential gemmuloscleres in the gemmular theca. Pectispongilla gagudjuensis n. sp. diverges from the diagnostic traits of the four species currently assigned to the genus i.e. skeletal megascleres are dominant acanthostrongyles and less frequent acanthoxeas shorter than in the other species, microscleres are absent, and gemmules are larger than in the other species of the genus.
Topics: Animal Distribution; Animals; Fresh Water; Northern Territory; Porifera; Species Specificity
PubMed: 27988681
DOI: 10.11646/zootaxa.4196.1.3 -
Zootaxa May 2015We report here the first record of a living Potamolepidae (Cherokeesia n. gen.) from the Nearctic Region and from the northern hemisphere. The new species Cherokeesia...
We report here the first record of a living Potamolepidae (Cherokeesia n. gen.) from the Nearctic Region and from the northern hemisphere. The new species Cherokeesia armata from southern Appalachians diverges at generic and specific level from all the other known taxa of the family Potamolepidae in its unique combination of diagnostic traits: gemmular theca armed by gemmuloscleres ranging from small strongyle-like spicules to stout, large oxeas; absence of pneumatic layer; spiny oxeas as main skeleton megascleres; irregular, slender pauci- to uni-spicular skeletal network. The most similar species belong to the genera Potamophloios and Oncosclera. The circumtropical biogeographic pattern of extant Potamolepidae, previously considered of Gondwanian to Gondwanian-like origin, is enlarged to the Nearctic. The present Tennessee discovery confirms a wider range of the family. An updated species inventory of Nearctic Spongillina, a checklist of the family Potamolepidae at the global level together with a key to the genera of Potamolepidae are also provided.
Topics: Animal Distribution; Animal Structures; Animals; Body Size; Ecosystem; Organ Size; Phylogeny; Porifera; Rivers
PubMed: 26249051
DOI: 10.11646/zootaxa.3957.1.2 -
Advances in Marine Biology 2012Knowledge of the functioning, health state, and capacity for recovery of marine benthic organisms and assemblages has become essential to adequately manage and preserve... (Review)
Review
Knowledge of the functioning, health state, and capacity for recovery of marine benthic organisms and assemblages has become essential to adequately manage and preserve marine biodiversity. Molecular tools have allowed an entirely new way to tackle old and new questions in conservation biology and ecology, and sponge science is following this lead. In this review, we discuss the biological and ecological studies of sponges that have used molecular markers during the past 20 years and present an outlook for expected trends in the molecular ecology of sponges in the near future. We go from (1) the interface between inter- and intraspecies studies, to (2) phylogeography and population level analyses, (3) intra-population features such as clonality and chimerism, and (4) environmentally modulated gene expression. A range of molecular markers has been assayed with contrasting success to reveal cryptic species and to assess the genetic diversity and connectivity of sponge populations, as well as their capacity to respond to environmental changes. We discuss the pros and cons of the molecular gene partitions used to date and the prospects of a plentiful supply of new markers for sponge ecological studies in the near future, in light of recently available molecular technologies. We predict that molecular ecology studies of sponges will move from genetics (the use of one or some genes) to genomics (extensive genome or transcriptome sequencing) in the forthcoming years and that sponge ecologists will take advantage of this research trend to answer ecological and biological questions that would have been impossible to address a few years ago.
Topics: Animals; Demography; Ecosystem; Gene Expression Regulation; Phylogeography; Porifera
PubMed: 22560781
DOI: 10.1016/B978-0-12-387787-1.00006-4 -
Zootaxa Jul 2015Systematics and distribution of freshwater sponges is still poorly understood worldwide. This may be due to the scarcity of records, and the limited information about...
Systematics and distribution of freshwater sponges is still poorly understood worldwide. This may be due to the scarcity of records, and the limited information about morphological traits used for taxonomy. Brazil has reportedly high species richness in the Neotropical Region; however, this diversity is likely to be significantly underestimated given that there are still many unexplored and poorly sampled areas, mainly in the north and northeast regions. We present here new locality records and taxonomic notes on three families and ten species of freshwater Porifera from northeast Brazil: Metaniidae (1), Potamolepidae (2) and Spongillidae (7). A new species of freshwater sponge is described here (Ephydatia caatingae sp.nov.). Additional notes on the systematics and biogeography of most of these species are also presented.
Topics: Animals; Brazil; Fresh Water; Porifera
PubMed: 26249990
DOI: 10.11646/zootaxa.3981.2.4 -
Briefings in Functional Genomics Sep 2016A key aim in evolutionary biology is to deduce ancestral states to better understand the evolutionary origins of clades of interest and the diversification process(es)... (Review)
Review
A key aim in evolutionary biology is to deduce ancestral states to better understand the evolutionary origins of clades of interest and the diversification process(es) that has/have elaborated them. These ancestral deductions can hit difficulties when undetected loss events are misinterpreted as ancestral absences. With the ever-increasing amounts of animal genomic sequence data, we are gaining a much clearer view of the preponderance of differential gene losses across animal lineages. This has become particularly clear with recent progress in our understanding of the origins of the Hox/ParaHox developmental control genes relative to the earliest branching lineages of the animal kingdom: the sponges (Porifera), comb jellies (Ctenophora) and placozoans (Placozoa). These reassessments of the diversity and complexity of developmental control genes in the earliest animal ancestors need to go hand-in-hand with complementary advances in comparative morphology, phylogenetics and palaeontology to clarify our understanding of the complexity of the last common ancestor of all animals. The field is currently undergoing a shift from the traditional consensus of a sponge-like animal ancestor from which morphological and molecular elaboration subsequently evolved, to a scenario of a more complex animal ancestor, with subsequent losses and simplifications in various lineages.
Topics: Animals; Evolution, Molecular; Gene Expression Regulation; Gene Expression Regulation, Developmental; Genes, Homeobox; Genome; Porifera
PubMed: 26637506
DOI: 10.1093/bfgp/elv056 -
Systematic Biology Jun 2008Reconstructing the phylogeny of sponges (Porifera) is one of the remaining challenges to resolve the metazoan Tree of Life and is a prerequisite for understanding early...
Reconstructing the phylogeny of sponges (Porifera) is one of the remaining challenges to resolve the metazoan Tree of Life and is a prerequisite for understanding early animal evolution. Molecular phylogenetic analyses for two of the three extant classes of the phylum, Demospongiae and Calcarea, are largely incongruent with traditional classifications, most likely because of a paucity of informative morphological characters and high levels of homoplasy. For the third class, Hexactinellida (glass sponges)--predominantly deep-sea inhabitants with unusual morphology and biology--we present the first molecular phylogeny, along with a cladistic analysis of morphological characters. We collected 18S, 28S, and mitochondrial 16S ribosomal DNA sequences of 34 glass sponge species from 27 genera, 9 families, and 3 orders and conducted partitioned Bayesian analyses using RNA secondary structure-specific substitution models (paired-sites models) for stem regions. Bayes factor comparisons of different paired-sites models against each other and conventional (independent-sites) models revealed a significantly better fit of the former but, contrary to previous predictions, the least parameter-rich of the tested paired-sites models provided the best fit to our data. In contrast to Demospongiae and Calcarea, our rDNA phylogeny agrees well with the traditional classification and a previously proposed phylogenetic system, which we ascribe to a more informative morphology in Hexactinellida. We find high support for a close relationship of glass sponges and Demospongiae sensu stricto, though the latter may be paraphyletic with respect to Hexactinellida. Homoscleromorpha appears to be the sister group of Calcarea. Contrary to most previous findings from rDNA, we recover Porifera as monophyletic, although support for this clade is low under paired-sites models.
Topics: Animals; Base Sequence; Bayes Theorem; Biological Evolution; DNA, Ribosomal; Microscopy, Electron, Scanning; Models, Genetic; Phylogeny; Porifera; Sequence Alignment; Sequence Analysis, DNA; Sequence Analysis, RNA
PubMed: 18570034
DOI: 10.1080/10635150802161088 -
Journal of Experimental Zoology. Part... Jun 2016Sessile marine invertebrates living on hard substrata usually present strategies such as size variations, longer life spans, fragmentation and fusion to occupy and...
Sessile marine invertebrates living on hard substrata usually present strategies such as size variations, longer life spans, fragmentation and fusion to occupy and compete for space. Calcareous sponges are usually small and short-lived, and some species are known to undergo frequent fragmentation and fusion events. However, whether fusion occurs only between genetically identical individuals remains unclear. We investigated the occurrence of chimaeras in the calcareous sponge Clathrina aurea by following the dynamics of fragmentation and fusion of 66 individuals in the field for up to 18 months and determined size variations and the life span of each individual. Microsatellites were used to determine whether fusion events occur among genetically different individuals. Growth and shrinkage of individuals were frequently observed, showing that size cannot be associated with age in C. aurea. The life span of the species ranged from 1 to 16 months (mean: 4.7 months). Short life spans and variable growth rates have been observed in other species of the class Calcarea. Fragmentation and fusion events were observed, but fusion events always occurred between genetically identical individuals, as has been suggested by graft experiments in adult Demospongiae and other Calcarea. These results suggest that at least C. aurea adults may have some mechanism to avoid chimaerism.
Topics: Animals; Brazil; Genetic Variation; Genotype; Islands; Porifera
PubMed: 27194182
DOI: 10.1002/jez.2017 -
The ISME Journal Jan 2009
Topics: Animals; Bacterial Physiological Phenomena; Porifera; Symbiosis
PubMed: 18971962
DOI: 10.1038/ismej.2008.102 -
Micron (Oxford, England : 1993) 2008Since the early 19th century, the skeletons of calcareous sponges (Porifera: Calcarea) with their mineralized spicules have been investigated for their morphologies,... (Review)
Review
Since the early 19th century, the skeletons of calcareous sponges (Porifera: Calcarea) with their mineralized spicules have been investigated for their morphologies, structures, and mineralogical and organic compositions. These biomineral spicules, up to about 10mm in size, with one to four rays called actines, have various specific shapes and consist mainly of magnesium-calcite: in only one case has an additional phase of stabilized amorphous CaCO3 (ACC) been discovered. The spicules are invariably covered by a thin organic sheath and display a number of intriguing properties. Despite their complex morphologies and rounded surfaces without flat crystal faces they behave largely as single crystal individuals of calcite, and to some degree crystallographic orientation is related to morphology. Despite their single-crystalline nature, most spicules show nearly isotropic fracture behaviour, not typical for calcite crystals, indicating enhanced fracture resistance. These unusual morphological and mechanical properties are the result of their mechanism of growth. Each spicule is formed by specialized cells (sclerocytes) that supply mineral ions or particles associated by organic macromolecules to extracellular cavities, where assembly and crystallization in alignment with an initial seed crystal (nucleus) takes place. As a result of discontinuous mineral deposition, cross-sections of larger spicules display concentric layering that mantles a central calcitic rod. On a smaller scale, the entire spicule displays a 'nano-cluster' structure with crystallographically aligned and putatively semicoherent crystal domains as well as a dispersed organic matrix intercalated between domain boundaries. This ultrastructure dissipates mechanical stress and deflects propagating fractures. Additionally, this nano-cluster construction, probably induced by intercalated organic substances, enables the formation of complex crystal morphologies independent of crystal faces. In this review, the current knowledge about the structure, composition, and formation of calcareous sponge spicules is summarised and discussed. Comparisons of calcareous sponge spicules with the amorphous silica spicules of sponges of the classes Hexactinellida and Demospongiae, as well as with calcitic skeletal elements of echinoderms are drawn. Despite the variety of poriferan spicule mineralogy and the distant phylogenetic relationship between sponges and echinoderms, all of these biominerals share similarities regarding their nano-scale construction. Furthermore, echinoderm skeletal elements resemble calcareous sponge spicules in that they represent magnesium-bearing calcite single-crystals with extremely complex morphologies.
Topics: Animals; Crystallography; Microscopy, Electron, Transmission; Minerals; Morphogenesis; Organic Chemicals; Porifera
PubMed: 17360189
DOI: 10.1016/j.micron.2007.01.006