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Biology Letters Mar 2024During pregnancy, the mammalian immune system must simultaneously protect against pathogens while being accommodating to the foreign fetal tissues. Our current...
During pregnancy, the mammalian immune system must simultaneously protect against pathogens while being accommodating to the foreign fetal tissues. Our current understanding of this immune modulation derives predominantly from industrialized human populations and laboratory animals. However, their environments differ considerably from the pathogen-rich, resource-scarce environments in which pregnancy and the immune system co-evolved. For a better understanding of immune modulation during pregnancy in challenging environments, we measured urinary neopterin, a biomarker of cell-mediated immune responses, in 10 wild female bonobos () before, during and after pregnancy. Bonobos, sharing evolutionary roots and pregnancy characteristics with humans, serve as an ideal model for such investigation. Despite distinct environments, we hypothesized that cell-mediated immune modulation during pregnancy is similar between bonobos and humans. As predicted, neopterin levels were higher during than outside of pregnancy, and highest in the third trimester, with a significant decline post-partum. Our findings suggest shared mechanisms of cell-mediated immune modulation during pregnancy in bonobos and humans that are robust despite distinct environmental conditions. We propose that these patterns indicate shared immunological processes during pregnancy among hominins, and possibly other primates. This finding enhances our understanding of reproductive immunology.
Topics: Pregnancy; Animals; Humans; Female; Pan paniscus; Neopterin; Immunity, Cellular; Biological Evolution; Pan troglodytes; Mammals
PubMed: 38471567
DOI: 10.1098/rsbl.2023.0548 -
Frontiers in Cellular and Infection... 2024Endogenous retroviruses (ERVs) originate from ancestral germline infections caused by exogenous retroviruses. Throughout evolution, they have become fixed within the...
Endogenous retroviruses (ERVs) originate from ancestral germline infections caused by exogenous retroviruses. Throughout evolution, they have become fixed within the genome of the animals into which they were integrated. As ERV elements coevolve with the host, they are normally epigenetically silenced and can become upregulated in a series of physiological and pathological processes. Generally, a detailed ERV profile in the host genome is critical for understanding the evolutionary history and functional performance of the host genome. We previously characterized and cataloged all the ERV-K subtype HML-8 loci in the human genome; however, this has not been done for the chimpanzee, the nearest living relative of humans. In this study, we aimed to catalog and characterize the integration of HML-8 in the chimpanzee genome and compare it with the integration of HML-8 in the human genome. We analyzed the integration of HML-8 and found that HML-8 pervasively invaded the chimpanzee genome. A total of 76 proviral elements were characterized on 23/24 chromosomes, including detailed elements distribution, structure, phylogeny, integration time, and their potential to regulate adjacent genes. The incomplete structure of HML-8 proviral LTRs will undoubtedly affect their activity. Moreover, the results indicated that HML-8 integration occurred before the divergence between humans and chimpanzees. Furthermore, chimpanzees include more HML-8 proviral elements (76 vs. 40) and fewer solo long terminal repeats (LTR) (0 vs. 5) than humans. These results suggested that chimpanzee genome activity is less than the human genome and that humans may have a better ability to shape and screen integrated proviral elements. Our work is informative in both an evolutionary and a functional context for ERVs.
Topics: Animals; Humans; Endogenous Retroviruses; Pan troglodytes; Proviruses; Genome, Human; Genomics
PubMed: 38456081
DOI: 10.3389/fcimb.2024.1349046 -
Comparative Biochemistry and... 2024Ecometabolomics could be implemented as a powerful tool in molecular ecology studies, but it is necessary to know the baseline of certain metabolites and understand how...
Ecometabolomics could be implemented as a powerful tool in molecular ecology studies, but it is necessary to know the baseline of certain metabolites and understand how different traits could affect the metabolome of the animals. Therefore, the main objective of this study was to provide values for the nutritional metabolome profile of different diet groups and animal species, as well as to study the differences in the metabolomic profile due to the effect of diet type and species. To achieve this goal, blood samples were taken from healthy animals (n = 43) of different species: lion (Panthera leo), jaguar (Panthera onca), chimpanzee (Pan troglodytes), bison (Bison bison), gazelle (Gazella cuvieri) and fallow deer (Dama dama), and with different types of diet (carnivore, herbivore and omnivore). Each blood sample was analysed to determine nutritional metabolites. The main results this study provides are the nutritional metabolic profile of these animals based on the type of diet and the animal species. A significant effect of the dietary type was found on nutritional metabolite levels, with those metabolites related to protein metabolism (total protein and creatine) being higher in carnivores. There is also an effect of the species on nutritional metabolites, observing a metabolome differentiation between lion and jaguar. In the case of herbivores, bison showed higher levels of uric acid and cholesterol, and lower urea levels than gazelle and fallow deer. More molecular ecology studies are needed to further the knowledge of the metabolism of these animals.
Topics: Animals; Herbivory; Deer; Lions; Bison; Antelopes; Diet; Metabolome; Panthera
PubMed: 38452851
DOI: 10.1016/j.cbpb.2024.110965 -
PloS One 2024To address the issue of poor performance in the chimp optimization (ChOA) algorithm, a new algorithm called the manta ray-based chimpa optimization algorithm (MChOA) was...
To address the issue of poor performance in the chimp optimization (ChOA) algorithm, a new algorithm called the manta ray-based chimpa optimization algorithm (MChOA) was developed. Introducing the Latin hypercube method to construct the initial population so that the individuals of the initial population are evenly distributed in the solution space, increasing the diversity of the initial population. Introducing nonlinear convergence factors based on positive cut functions to changing the convergence of algorithms, the early survey capabilities and later development capabilities of the algorithm are balanced. The manta ray foraging strategy is introduced at the position update to make up for the defect that the algorithm is prone to local optimization, which effectively improves the optimization performance of the algorithm. To evaluate the performance of the proposed algorithm, 27 well-known test reference functions were selected for experimentation, which showed significant advantages compared to other algorithms. Finally, in order to further verify the algorithm's applicability in actual production processes, it was applied to solve scheduling problems in three flexible workshop scenarios and an aviation engine job shop scheduling in an enterprise. This confirmed its efficacy in addressing complex real-world problems.
Topics: Humans; Animals; Algorithms; Aviation; Elasmobranchii; Empirical Research; Pan troglodytes
PubMed: 38451921
DOI: 10.1371/journal.pone.0298230 -
Nature Human Behaviour May 2024Cumulative cultural evolution has been claimed to be a uniquely human phenomenon pivotal to the biological success of our species. One plausible condition for cumulative...
Cumulative cultural evolution has been claimed to be a uniquely human phenomenon pivotal to the biological success of our species. One plausible condition for cumulative cultural evolution to emerge is individuals' ability to use social learning to acquire know-how that they cannot easily innovate by themselves. It has been suggested that chimpanzees may be capable of such know-how social learning, but this assertion remains largely untested. Here we show that chimpanzees use social learning to acquire a skill that they failed to independently innovate. By teaching chimpanzees how to solve a sequential task (one chimpanzee in each of the two tested groups, n = 66) and using network-based diffusion analysis, we found that 14 naive chimpanzees learned to operate a puzzle box that they failed to operate during the preceding three months of exposure to all necessary materials. In conjunction, we present evidence for the hypothesis that social learning in chimpanzees is necessary and sufficient to acquire a new, complex skill after the initial innovation.
Topics: Pan troglodytes; Animals; Social Learning; Male; Female; Cultural Evolution; Learning; Social Behavior
PubMed: 38448718
DOI: 10.1038/s41562-024-01836-5 -
Nature Mar 2024
Topics: Animals; Bees; Pan troglodytes; Social Behavior; Biological Evolution
PubMed: 38448527
DOI: 10.1038/d41586-024-00427-8 -
Behavior Research Methods Mar 2024Parsing signals from noise is a general problem for signallers and recipients, and for researchers studying communicative systems. Substantial efforts have been invested...
Parsing signals from noise is a general problem for signallers and recipients, and for researchers studying communicative systems. Substantial efforts have been invested in comparing how other species encode information and meaning, and how signalling is structured. However, research depends on identifying and discriminating signals that represent meaningful units of analysis. Early approaches to defining signal repertoires applied top-down approaches, classifying cases into predefined signal types. Recently, more labour-intensive methods have taken a bottom-up approach describing detailed features of each signal and clustering cases based on patterns of similarity in multi-dimensional feature-space that were previously undetectable. Nevertheless, it remains essential to assess whether the resulting repertoires are composed of relevant units from the perspective of the species using them, and redefining repertoires when additional data become available. In this paper we provide a framework that takes data from the largest set of wild chimpanzee (Pan troglodytes) gestures currently available, splitting gesture types at a fine scale based on modifying features of gesture expression using latent class analysis (a model-based cluster detection algorithm for categorical variables), and then determining whether this splitting process reduces uncertainty about the goal or community of the gesture. Our method allows different features of interest to be incorporated into the splitting process, providing substantial future flexibility across, for example, species, populations, and levels of signal granularity. Doing so, we provide a powerful tool allowing researchers interested in gestural communication to establish repertoires of relevant units for subsequent analyses within and between systems of communication.
PubMed: 38438657
DOI: 10.3758/s13428-024-02368-6 -
Journal of Comparative Psychology... Feb 2024Animals navigate complex environments that present both hazards and essential resources. The prioritization of perceptual information that is relevant to their next...
Animals navigate complex environments that present both hazards and essential resources. The prioritization of perceptual information that is relevant to their next actions, such as accessing or avoiding different resources, poses a potential challenge to animals, one that can impact survival. While animals' attentional biases toward negatively valanced and threatening stimuli have been explored, parallel biases toward differently valued resources remain understudied. Here, we assessed whether three primate species (chimpanzees [], gorillas [], and Japanese macaques []) prioritized their attention to positively valued resources-preferred foods compared to unpreferred foods. We employed a computerized dot probe attentional bias task in which we presented participants with paired images of their preferred and unpreferred foods in randomized locations (left or right). Latencies to touch the "probe" that replaced either image revealed that all three species responded faster to the probe when it replaced the preferred option (χ²(1) = 284.50, ² = .03, < .001). The uniformity of the primates' responses hints that a propensity to prioritize highly preferred items is rooted in these primates' evolutionary past, one that may serve as a mechanism to rapidly detect and locate resources such as highly valued foods. Future research will help disentangle the role that color plays in these biases. (PsycInfo Database Record (c) 2024 APA, all rights reserved).
PubMed: 38421739
DOI: 10.1037/com0000375 -
Cognition May 2024The strength of human society can largely be attributed to the tendency to work together to achieve outcomes that are not possible alone. Effective social coordination...
The strength of human society can largely be attributed to the tendency to work together to achieve outcomes that are not possible alone. Effective social coordination benefits from mentally representing a partner's actions. Specifically, humans optimize social coordination by forming internal action models adapted to joint rather than individual task demands. To what extent do humans share the cognitive mechanisms that support optimal human coordination and collaboration with other species? An ecologically inspired joint handover-to-retrieve task was systematically manipulated across several experiments to assess whether joint action planning in chimpanzees reflects similar patterns to humans. Chimpanzees' chosen handover locations shifted towards the location of the experimenter's free or unobstructed hand, suggesting they represent the constraints of the joint task even though their individual half of the task was unobstructed. These findings indicate that chimpanzees and humans may share common cognitive mechanisms or predispositions that support joint action.
Topics: Animals; Humans; Pan troglodytes; Behavior, Animal; Cooperative Behavior
PubMed: 38412760
DOI: 10.1016/j.cognition.2024.105747 -
Emerging Infectious Diseases Mar 2024Despite zoonotic potential, data are lacking on enteric infection diversity in wild apes. We employed a novel molecular diagnostic platform to detect enteric infections...
Despite zoonotic potential, data are lacking on enteric infection diversity in wild apes. We employed a novel molecular diagnostic platform to detect enteric infections in wild chimpanzees and gorillas. Prevalent Cryptosporidium parvum, adenovirus, and diarrheagenic Escherichia coli across divergent sites and species demonstrates potential widespread circulation among apes in Africa.
Topics: Animals; Gorilla gorilla; Pan troglodytes; Cameroon; Tanzania; Cryptosporidiosis; Cryptosporidium; Escherichia coli
PubMed: 38407249
DOI: 10.3201/eid3003.230318