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Plants (Basel, Switzerland) Jun 2023The conservation of the genetic resources of old trees is crucial to their ecological role but is extremely difficult, especially for oak species ( spp.) displaying...
The conservation of the genetic resources of old trees is crucial to their ecological role but is extremely difficult, especially for oak species ( spp.) displaying recalcitrance in seed and vegetative propagation methods. Our study aimed to assess the regenerative potential of trees of different ages (up to 800 years) during micropropagation. We also aimed to determine how in vitro conditions can influence in vitro regeneration responses. Lignified branches collected from 67 selected trees were cultivated ex vitro in culture pots at 25 °C to obtain epicormic shoots (explant sources). The explants were cultivated on an agar medium supplemented with 0.8 mg L 6-benzylaminopurine (BAP) for at least 21 months. In a second experiment, two different shoot multiplication conditions (temporary immersion-RITA bioreactor and agar medium) and two culture medium formulations (Woody Plant Medium and modified Quoirin and Lepoivre medium) were tested. The results showed that the mean length of the epicormic shoots obtained in a pot culture was a function of donor age and was similar among the group of younger trees (ca. 20-200 years), and varied between older trees (ca. 300-800 years). The efficiency of in vitro shoot multiplication strictly depended on the genotype. A sustainable in vitro culture (defined as survival after 6 months) was only possible for half of the tested old donor trees, even when they survived the first month of in vitro growth. A continuous monthly increase in the number of in vitro cultured shoots was reported in younger oaks and in some old oaks. We found a significant effect of the culture system and the macro- and micronutrient composition on in vitro shoot growth. This is the first report demonstrating that the in vitro culture can be successfully applied to the propagation of even 800-year-old pedunculate oak trees.
PubMed: 37375856
DOI: 10.3390/plants12122230 -
Cureus Apr 2023Introduction Colonoscopic polypectomy is a well-established screening and surveillance modality for malignant colorectal polyps. Following the detection of a malignant...
Introduction Colonoscopic polypectomy is a well-established screening and surveillance modality for malignant colorectal polyps. Following the detection of a malignant polyp, patients are either put on endoscopic surveillance or planned for a surgical procedure. We studied the outcome of colonoscopic excision of malignant polyps and their recurrence rates. Methods We performed a retrospective analysis over a period of five years (2015-2019) of patients who underwent colonoscopy and resection of malignant polyps. Size of polyp, follow-up with tumour markers, CT scan, and biopsy were considered individually for pedunculate and sessile polyps. We analysed the percentage of patients who underwent surgical resection, the percentage of patients who were managed conservatively, and the percentage of recurrence post-excision of malignant polyps. Results A total of 44 patients were included in the study. Of the 44 malignant polyps, most were present in the sigmoid colon at 43% (n=19), with the rectum containing 41% (n=18). The ascending colon accounted for 4.5% (n=2), transverse colonic polyps were 7% (n=3), and the descending colon polyps were 4.5% (n=2). Pedunculated polyps made up 55% (n=24). These were Level 1-3 based on Haggits classification; 14 were Haggits Level 1, eight were Haggits Level 2, and two were Haggits Level 3. The rest were sessile polyps making up 45% (n=20). Based on the Kikuchi classification, these were predominantly SM1 (n=12) and SM2 (n=8). Out of 44 cases, 11% (n=5) underwent surgical resection on follow-up in the form of bowel resection. This included three right hemicolectomies, one sigmoid colectomy, and one low anterior resection. Seven per cent (n=3) underwent endoscopic resection as trans-anal endoscopic mucosal resection (TEMS) and 82% (n=36) of the remaining cases were managed with regular follow-up and surveillance. Conclusions Colonoscopic polypectomy offers excellent benefits in detecting colorectal cancer and treating pre-malignant polyps. Colonoscopic polypectomy provides excellent benefits in colorectal cancer (CRC) detection and treatment of malignant polyps. However, it remains to be seen if post-polypectomy surveillance for low-risk polyp cancers would require a change in surveillance.
PubMed: 37228528
DOI: 10.7759/cureus.38027 -
International Journal of Molecular... Apr 2023The drought sensitivity of the pedunculate oak ( L.) poses a threat to its survival in light of climate change. Mycorrhizal fungi, which orchestrate biogeochemical...
The drought sensitivity of the pedunculate oak ( L.) poses a threat to its survival in light of climate change. Mycorrhizal fungi, which orchestrate biogeochemical cycles and particularly have an impact on the plant's defense mechanisms and metabolism of carbon, nitrogen, and phosphorus, are among the microbes that play a significant role in the mitigation of the effects of climate change on trees. The study's main objectives were to determine whether ectomycorrhizal (ECM) fungi alleviate the effects of drought stress in pedunculate oak and to investigate their priming properties. The effects of two levels of drought (mild and severe, corresponding to 60% and 30% of field capacity, respectively) on the biochemical response of pedunculate oak were examined in the presence and absence of ectomycorrhizal fungi. To examine whether the ectomycorrhizal fungi modulate the drought tolerance of pedunculate oak, levels of plant hormones and polyamines were quantified using UPLC-TQS and HPLC-FD techniques in addition to gas exchange measurements and the main osmolyte amounts (glycine betaine-GB and proline-PRO) which were determined spectrophotometrically. Droughts increased the accumulation of osmolytes, such as proline and glycine betaine, as well as higher polyamines (spermidine and spermine) levels and decreased putrescine levels in both, mycorrhized and non-mycorrhized oak seedlings. In addition to amplifying the response of oak to severe drought in terms of inducible proline and abscisic acid (ABA) levels, inoculation with ECM fungi significantly increased the constitutive levels of glycine betaine, spermine, and spermidine regardless of drought stress. This study found that compared to non-mycorrhized oak seedlings, unstressed ECM-inoculated oak seedlings had higher levels of salicylic (SA) and abscisic acid (ABA) but not jasmonic acid (JA), indicating a priming mechanism of ECM is conveyed via these plant hormones. According to a PCA analysis, the effect of drought was linked to the variability of parameters along the PC1 axe, such as osmolytes PRO, GB, polyamines, and plant hormones such as JA, JA-Ile, SAG, and SGE, whereas mycorrhization was more closely associated with the parameters gathered around the PC2 axe (SA, ODPA, ABA, and E). These findings highlight the beneficial function of the ectomycorrhizal fungi, in particular , in reducing the effects of drought stress in pedunculate oak.
Topics: Mycorrhizae; Plant Growth Regulators; Quercus; Drought Resistance; Abscisic Acid; Betaine; Polyamines; Spermidine; Spermine; Droughts; Proline
PubMed: 37108671
DOI: 10.3390/ijms24087510 -
Life (Basel, Switzerland) Mar 2023Oak bark is a rich niche for beneficial bioactive compounds. It is known that the amount of the compounds found in plant tissues can depend on species, genotype, growth...
Oak bark is a rich niche for beneficial bioactive compounds. It is known that the amount of the compounds found in plant tissues can depend on species, genotype, growth site, etc., but it is unclear whether oak phenology, i.e., late or early bud burst, can also influence the amount of phenols and antioxidants that can be extracted. We tested two populations expressing different phenology and five half-sib families in each population to see how phenology, genotype, as well as extrahent differences (75% methanol or water) can determine the total phenol, total flavonoid content, as well as antioxidant activity. Significant statistical differences were found between half-sib families of the same population, between populations representing different oak phenology and different extrahents used. We determined that the extraction of flavonoids was more favorable when using water. So was antioxidant activity using one of the indicators, when significant differences between extrahents were observed. Furthermore, in families where there was a significant difference, phenols showed better results when using methanol. Overall, late bud burst families exhibited higher levels in all parameters tested. Thus, we recommend that for further bioactive compound extraction, all these factors be noted.
PubMed: 36983864
DOI: 10.3390/life13030710 -
Plants (Basel, Switzerland) Mar 2023We compared climate-growth relationships (1956-2013) of two natural pedunculate oak ( L.) stands with different water-holding capacities growing at the species...
We compared climate-growth relationships (1956-2013) of two natural pedunculate oak ( L.) stands with different water-holding capacities growing at the species distribution limit of the Mediterranean Region in NW Iberia. For this, tree-ring chronologies of earlywood vessel size (separating the first row from the other vessels) and latewood width were obtained. Earlywood traits were coupled to conditions during dormancy, whereby an elevated winter temperature appears to induce a high consumption of carbohydrates, resulting in smaller vessels. This effect was reinforced by waterlogging at the wettest site, whose correlation to winter precipitation was strongly negative. Soil water regimes caused differences between vessel rows, since all earlywood vessels were controlled by winter conditions at the wettest site, but only the first row at the driest one; radial increment was related to water availability during the previous rather than the current season. This confirms our initial hypothesis that oak trees near their southern distribution boundary adopt a conservative strategy, prioritizing reserve storage under limiting conditions during the growing period. We believe that wood formation is highly dependent on the balance between the previous accumulation of carbohydrates and their consumption to maintain both respiration during dormancy and early spring growth.
PubMed: 36904045
DOI: 10.3390/plants12051185 -
Plants (Basel, Switzerland) Feb 2023Oak powdery mildew caused by (Griffon and Maubl.; U. Braun & S. Takam.) is a common disease in European forests. One of the most susceptible species is the pedunculate...
Oak powdery mildew caused by (Griffon and Maubl.; U. Braun & S. Takam.) is a common disease in European forests. One of the most susceptible species is the pedunculate oak ( L.). Presently, a few methods are available to control powdery mildew, e.g., the use of fungicides (e.g., based on citric acid), antagonistic fungi or bacteria, chemical treatments (e.g., sulphur, potassium bicarbonate) or genetic resistance. In our study, we aimed to check the effects of using chitosan derivatives and novel active substances inducing the plants' natural resistance: benzodiathiadiazole (both in neutral and salt form). 84 pedunculate oak seedlings were subjected to the experiment in three treatment variants (plus positive and negative controls). The plants were treated with active substances and inoculated with . Although the powdery mildew symptoms appeared in all variants, they were manifested mainly by the in the form of small spots. The experiment indicated that the highest limitation of powdery mildew was achieved by applying -methyl--methoxyamide-7-carboxybenzo(1,2,3)thiadiazole (BTHWA). The application of BTHWA reduced disease development by 88.9% when compared to the effects of the other variants.
PubMed: 36771718
DOI: 10.3390/plants12030635 -
Journal of Biogeography Dec 2022Leaves support a large diversity of fungi, which are known to cause plant diseases, induce plant defences or influence leaf senescence and decomposition. To advance our...
AIM
Leaves support a large diversity of fungi, which are known to cause plant diseases, induce plant defences or influence leaf senescence and decomposition. To advance our understanding of how foliar fungal communities are structured and assembled, we assessed to what extent leaf flush and latitude can explain the within- and among-tree variation in foliar fungal communities.
LOCATION
A latitudinal gradient spanning . 20 degrees in latitude in Europe.
TAXA
The foliar fungal community associated with a foundation tree species, the pedunculate oak .
METHODS
We examined the main and interactive effects of leaf flush and latitude on the foliar fungal community by sampling 20 populations of the pedunculate oak across the tree's range. We used the ITS region as a target for characterization of fungal communities using DNA metabarcoding.
RESULTS
Species composition, but not species richness, differed between leaf flushes. Across the latitudinal gradient, species richness was highest in the central part of the oak's distributional range, and foliar fungal community composition shifted along the latitudinal gradient. Among fungal guilds, the relative abundance of plant pathogens and mycoparasites was lower on the first leaf flush, and the relative abundance of plant pathogens and saprotrophs decreased with latitude.
CONCLUSIONS
Changes in community composition between leaf flushes and along the latitudinal gradient were mostly a result of species turnover. Overall, our findings demonstrate that leaf flush and latitude explain 5%-22% of the small- and large-scale spatial variation in the foliar fungal community on a foundation tree within the temperate region. Using space-for-time substitution, we expect that foliar fungal community structure will change with climate warming, with an increase in the abundance of plant pathogens and mycoparasites at higher latitudes, with major consequences for plant health, species interactions and ecosystem dynamics.
PubMed: 36636040
DOI: 10.1111/jbi.14508 -
Materials (Basel, Switzerland) Jan 2023Subfossil wood is a valuable and rare material often used for production of expensive furniture and decorative artistic items of unique beauty. Its mechanical and...
Subfossil wood is a valuable and rare material often used for production of expensive furniture and decorative artistic items of unique beauty. Its mechanical and tribological properties are still being studied and are considered specific due to the particular conditions of its long-lasting formation in aqueous sediment sludge. Various elements that have been impregnated into the wood tissue over many years make the machining and grinding of this type of wood rather difficult compared to normal recent wood. The main objective of this study was to determine the influence of the abrasive grain size of sandpaper on the abrasion volume loss of recent and two subfossil oak samples in three characteristic sections (cross, radial, and tangential). The results showed that the average size of abrasive grains and the orientation of the wood structure have an influence on the abrasion volume loss of all three samples. The phenomenon of the critical size of abrasive grains was observed in all samples and on all sections. As the size of abrasive grains increased to the critical size, the abrasive volume loss of the sample increased simultaneously. The lowest abrasion volume loss was observed on recent oak. In all samples, the lowest volume loss was measured on the cross sections, and the tangential and radial sections had mutually equal values. It was also found that the increase in the size of abrasive grains to a critical value resulted in the increasing value of the absolute difference between the abrasion volume loss of the cross, radial, and tangential section samples, while the relative relations between the abrasive volume loss values of three different sections (C/R, C/T, R/T) within the same grit of sandpaper remained quite similar.
PubMed: 36614771
DOI: 10.3390/ma16010432 -
Plants (Basel, Switzerland) Dec 2022The physiological and biochemical responses of pedunculate oaks ( L.) to heat stress (HS) and mycorrhization (individually as well in combination) were estimated....
The physiological and biochemical responses of pedunculate oaks ( L.) to heat stress (HS) and mycorrhization (individually as well in combination) were estimated. One-year-old seedlings were grown under controlled conditions in a pot experiment, inoculated with a commercial inoculum of ectomycorrhizal (ECM) fungi, and subjected to 72 h of heat stress (40 °C/30 °C day/night temperature, relative humidity 80%, photoperiod 16/8 h) in a climate chamber, and they were compared with seedlings that were grown at room temperature (RT). An in-depth analysis of certain well-known stress-related metrics such as proline, total phenolics, FRAP, ABTS, non-protein thiols, and lipid peroxidation revealed that mycorrhized oak seedlings were more resistant to heat stress (HS) than non-mycorrhized oaks. Additionally, levels of specific polyamines, total phenolics, flavonoids, and condensed tannins as well as osmotica (proline and glycine betaine) content were measured and compared between four treatments: plants inoculated with ectomycorrhizal fungi exposed to heat stress (ECM-HS) and those grown only at RT (ECM-RT) versus non-mycorrhized controls exposed to heat stress (NM-HS) and those grown only at room temperature (NM-RT). In ectomycorrhiza inoculated oak seedlings, heat stress led to not only a rise in proline, total phenols, FRAP, ABTS, non-protein thiols, and lipid peroxidation but a notable decrease in glycine betaine and flavonoids. Amounts of three main polyamines (putrescine, spermine, and spermidine) were quantified by using high-performance liquid chromatography coupled with fluorescent detection (HPLC/FLD) after derivatization with dansyl-chloride. Heat stress significantly increased putrescine levels in non-mycorrhized oak seedlings but had no effect on spermidine or spermine levels, whereas heat stress significantly increased all inspected polyamine levels in oak seedlings inoculated with ectomycorrhizal inoculum. Spermidine (SPD) and spermine (SPM) contents were significantly higher in ECM-inoculated plants during heat stress (approximately 940 and 630 nmol g DW, respectively), whereas these compounds were present in smaller amounts in non-mycorrhized oak seedlings (between 510 and 550 nmol g DW for Spd and between 350 and 450 nmol g DW for Spm). These findings supported the priming and biofertilizer roles of ectomycorrhizal fungi in the mitigation of heat stress in pedunculate oaks by modification of polyamines, phenolics, and osmotica content.
PubMed: 36501399
DOI: 10.3390/plants11233360 -
Database : the Journal of Biological... Nov 2022The degree to which roots elongate is determined by the expression of genes that regulate root growth in each developmental zone of a root. Most studies have, however,...
The degree to which roots elongate is determined by the expression of genes that regulate root growth in each developmental zone of a root. Most studies have, however, focused on the molecular factors that regulate primary root growth in annual plants. In contrast, the relationship between gene expression and a specific pattern of taproot development and growth in trees is poorly understood. However, the presence of a deeply located taproot, with branching lateral roots, can especially mitigate the effect of insufficient water availability in long-lived trees, such as pedunculated oak. In the present article, we integrated the ribonucleic acid (RNA) sequencing data on roots of oak trees into a single comprehensive database, named OakRootRNADB that contains information on both coding and noncoding RNAs. The sequences in the database also enclose information pertaining to transcription factors, transcriptional regulators and chromatin regulators, as well as a prediction of the cellular localization of a transcript. OakRootRNADB has a user-friendly interface and functional tools that increase access to genomic information. Integrated knowledge of molecular patterns of expression, specifically occurring within and between root zones and within root types, can elucidate the molecular mechanisms regulating taproot growth and enhanced root soil exploration. Database URL https://oakrootrnadb.idpan.poznan.pl/.
Topics: Quercus; RNA; RNA-Seq; Plant Roots; Trees
PubMed: 36394419
DOI: 10.1093/database/baac097