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BioMed Research International 2017Next-generation DNA sequencing (NGS) has made it feasible to sequence large number of microbial genomes and advancements in computational biology have opened enormous...
Next-generation DNA sequencing (NGS) has made it feasible to sequence large number of microbial genomes and advancements in computational biology have opened enormous opportunities to mine genome sequence data for novel genes and enzymes or their sources. In the present communication in silico mining of microbial genomes has been carried out to find novel sources of nitrilases. The sequences selected were analyzed for homology and considered for designing motifs. The manually designed motifs based on amino acid sequences of nitrilases were used to screen 2000 microbial genomes (translated to proteomes). This resulted in identification of one hundred thirty-eight putative/hypothetical sequences which could potentially code for nitrilase activity. In vitro validation of nine predicted sources of nitrilases was done for nitrile/cyanide hydrolyzing activity. Out of nine predicted nitrilases, , , , and were specific for aliphatic nitriles, whereas nitrilases from , , , and possessed activity for aromatic nitriles. was specific towards potassium cyanide (KCN) which revealed the presence of nitrilase homolog, that is, cyanide dihydratase with no activity for either aliphatic, aromatic, or aryl nitriles. The present study reports the novel sources of nitrilases and cyanide dihydratase which were not reported hitherto by in silico or in vitro studies.
Topics: Aminohydrolases; Bacteria; Bacterial Proteins; Genome, Bacterial; High-Throughput Nucleotide Sequencing; Sequence Analysis, DNA
PubMed: 28497061
DOI: 10.1155/2017/7039245 -
FEBS Letters Dec 2017Respiratory supercomplex factor (Rcf) 1 is a membrane-bound protein that modulates the activity of cytochrome c oxidase (CytcO) in Saccharomyces cerevisiae...
Respiratory supercomplex factor (Rcf) 1 is a membrane-bound protein that modulates the activity of cytochrome c oxidase (CytcO) in Saccharomyces cerevisiae mitochondria. To investigate this regulatory mechanism, we studied the interactions of CytcO with potassium cyanide (KCN) upon removal of Rcf1. While the addition of KCN to the wild-type mitochondria results in a full reduction of heme a, with the rcf1Δ mitochondria, a significant fraction remains oxidized. Upon addition of ascorbate in the presence of O and KCN, the reduction level of hemes a and b was a factor of ~ 2 larger with the wild-type than with the rcf1Δ mitochondria. These data indicate that turnover of CytcO was less blocked in rcf1Δ than in the wild-type mitochondria, suggesting that Rcf1 modulates the structure of the catalytic site.
Topics: Catalytic Domain; Electron Transport; Electron Transport Complex IV; Mitochondria; Organisms, Genetically Modified; Oxidation-Reduction; Oxygen; Potassium Cyanide; Saccharomyces cerevisiae; Saccharomyces cerevisiae Proteins
PubMed: 29171870
DOI: 10.1002/1873-3468.12918 -
Clinical Toxicology (Philadelphia, Pa.) Jan 2022Cyanide (CN) is a metabolic poison that is capable of intoxicating individuals through accidental or intentional means. With high concentration exposures, death can...
BACKGROUND
Cyanide (CN) is a metabolic poison that is capable of intoxicating individuals through accidental or intentional means. With high concentration exposures, death can occur in minutes. In cases of mass casualty exposures, there is a need for a rapid-acting countermeasure capable of being administered in a short period of time in a pre-hospital setting to treat victims.
OBJECTIVE
These studies evaluate the safety and efficacy of a novel aqueous formulation of dimethyl trisulfide (DMTS) as an intramuscular (IM) CN countermeasure using non-anesthetized rodent models.
METHODS
Non-anesthetized rodents (mice and rats) were exposed to hydrogen cyanide (HCN) or potassium cyanide (KCN) along with immediate IM 10% DMTS treatment or vehicle treatment. Survival and other parameters, such as the time to recovery and assessment of clinical toxic signs (e.g., gasping, loss of righting reflex, convulsions, etc.), were quantified to determine the effectiveness of 10% DMTS treatment (12.5, 25, 75 mg/kg IM) compared to vehicle control treatment. A rat KCN delayed-treatment model with a 15-minute treatment delay was also utilized to simulate a real-life exposure/treatment scenario with 10% DMTS treatment. The stability of the 10% DMTS formulation was also assessed.
RESULTS
A 25 mg/kg IM dose of 10% DMTS exhibits potent efficacy against subcutaneous (SC) KCN challenge in both mice and rats and inhalational HCN exposure in mice. 10% DMTS treatment also shortens the time to recovery in rats using a delayed-treatment model.
CONCLUSION
IM treatment with 10% DMTS improves survival and clinical outcomes in non-anesthetized rodent models of acute CN toxicity. Additionally, the use of an SC KCN delayed-treatment model in rats is advised to assess the performance of a candidate CN countermeasure in a more realistic exposure/treatment scenario.
Topics: Animals; Antidotes; Cyanides; Humans; Mice; Potassium Cyanide; Rats; Sulfides
PubMed: 34219566
DOI: 10.1080/15563650.2021.1935991 -
Turkish Journal of Chemistry 2020A study of the electrodeposition of silver from 2 different types of electrolytes; (1) neutral pyrophosphatecyanide electrolyte and (2) alkaline high concentrated...
A study of the electrodeposition of silver from 2 different types of electrolytes; (1) neutral pyrophosphatecyanide electrolyte and (2) alkaline high concentrated cyanide electrolyte in the presence of a variety of additives such as 2-mercaptobenzothiazole, potassium selenocyanate, and potassium antimony tartrate was performed. Influence of additives and cyanide concentration on microstructure and kinetics of the cathodic processes were studied. A brightener couple, 2-mercaptobenzothiazole and potassium antimony tartrate, were combined within this investigation and detected to be highly effective for silver electrodeposition. The rapid increase in current density at the same potential interval related to grain refinement effect of potassium antimony tartrate was shown. The cyclic organic compound, 2-mercaptobenzothiazole, polarizes the reduction to high cathodic potential in pyrophosphate electrolyte. However, the sufficient levelling effect required for the mirror-bright appearance seems to be related to the high polarizing effect of the high concentration cyanide content. In the case of pyrophosphate electrolytes, sufficient levelling cannot be achieved, so semigloss coatings are obtained. The low cathodic potential electrodeposition of silver in pyrophosphate electrolyte, which is found to proceed by 3D instantaneous nucleation, is polarized to high cathodic potentials and grows into 3D progressive nucleation and diffusion-controlled growth in high concentration cyanide electrolyte.
PubMed: 33488164
DOI: 10.3906/kim-1907-80 -
International Microbiology : the... Nov 2020Application of metal-resistant rhizobacteria is a promising approach for detoxification and bioremediation of contaminated soils. In order to isolate, identify, and...
Application of metal-resistant rhizobacteria is a promising approach for detoxification and bioremediation of contaminated soils. In order to isolate, identify, and characterize lead and cadmium-resistant bacteria, nearly 30 soil samples were collected from heavy metal-contaminated sites, and five resistant bacterial strains were isolated and identified based on their cultural, physiological, biochemical, and molecular characteristics as Enterobacter cloacae, Enterobacter kobei, Bacillus cereus, Rhizobium pusense, and Agrobacterium tumefaciens. The nucleotide information of these strains is available in GenBank under the accession numbers of MH327251, MH327252, MH327253, MH327254, and MK123361, respectively. The minimum inhibitory concentrations (MICs) against lead and cadmium differed for each isolate and the isolates showed higher MIC against lead (3500 μg ml) than cadmium (100 μg ml). Assessment of the heavy metal degradation capacity of the species showed 10-60% and 5-40% reduction in concentrations of lead and cadmium, respectively. The highest ability for P-solubilization was measured for the R. pusense, A. tumefaciens, and B. cereus species, while the R. pusense and B. cereus species had the capability to solubilize potassium. The studied species also had the ability to produce indole acetic acid (IAA) and/or hydrogen cyanide production (HCN). Inoculation of ornamental cabbage cultivated in a heavy metal-contaminated soil with the isolated species significantly increased biomass and Pb and Cd uptake of the plant. With respect to plant growth promoting and heavy metal-resistant traits of the studied species, it is concluded that these species can have great significance in bioremediation and management of environmental pollution.
Topics: Bacteria; Biodegradation, Environmental; Cadmium; Drug Resistance, Bacterial; Lead; Microbial Sensitivity Tests; Plant Roots; Soil Microbiology; Soil Pollutants
PubMed: 32533267
DOI: 10.1007/s10123-020-00133-1 -
Life (Basel, Switzerland) Oct 2022Cyanide (CN) pollution in agricultural systems can affect crop production. However, no data are available to describe the full picture of the responsive metabolic...
Cyanide (CN) pollution in agricultural systems can affect crop production. However, no data are available to describe the full picture of the responsive metabolic mechanisms of genes with known functions related to exogenous KCN exposure. In this study, we examined the transcriptome in rice seedlings exposed to potassium cyanide (KCN) using an Agilent 4×44K rice microarray to clarify the relationship between the differentially expressed genes (DEGs) and their function classifications. The number of DEGs (up-regulated genes/down-regulated genes) was 322/626 and 640/948 in the shoots and roots of CN-treated rice seedlings, respectively. Functional predication demonstrated that a total of 534 and 837 DEGs in shoots and roots were assigned to 22 COG categories. Four common categories listed on the top five COG classifications were detected in both rice tissues: signal transduction mechanisms, carbohydrate transport and metabolism, post-translational modification, protein turnover and chaperones, and transcription. A comparison of DEGs aligned to the same COG classification demonstrated that the majority of up-regulated/down-regulated DEGs in rice tissues were significantly different, suggesting that responsive and regulatory mechanisms are tissue specific in CN-treated rice seedlings. Additionally, fifteen DEGs were aligned to three different COG categories, implying their possible multiple functions in response to KCN stress. The results presented here provide insights into the novel responsive and regulatory mechanisms of KCN-responsive genes, and will serve as useful resources for further functional dissections of the physiological significance of specific genes activated in the exogenous KCN stress response in rice plants.
PubMed: 36362856
DOI: 10.3390/life12111701 -
Saudi Pharmaceutical Journal : SPJ :... Oct 2023Onion contains many dietary and bioactive components including phenolics and flavonoids. Spiraeoside (quercetin-4-O-β-D-glucoside) is one of the most putative...
Onion contains many dietary and bioactive components including phenolics and flavonoids. Spiraeoside (quercetin-4-O-β-D-glucoside) is one of the most putative flavonoids in onion. Several antioxidant techniques were used in this investigation to assess the antioxidant capabilities of spiraeoside, including 1,1-diphenyl-2-picrylhydrazyl radical (DPPH·) scavenging, N,N-dimethyl-p-phenylenediamine radical (DMPD) scavenging, 2,2'-azinobis-(3-ethylbenzothiazoline-6-sulphonate) radical (ABTS) scavenging activities, cupric ions (Cu) reducing and potassium ferric cyanide reduction abilities. In contrast, the water-soluble α-tocopherol analogue trolox and the conventional antioxidants butylated hydroxytoluene (BHT), butylated hydroxyanisole (BHA), and α-tocopherol were utilized as the standards for evaluation. Spiraeoside scavenged the DPPH radicals an IC of 28.51 μg/mL (r: 0.9705) meanwhile BHA, BHT, trolox, and α-tocopherol displayed IC of 10.10 μg/mL (r: 0.9015), 25.95 μg/mL (r: 0.9221), 7.059 μg/mL (r: 0.9614) and 11.31 μg/mL (r: 0.9642), accordingly. The results exhibited that spiraeoside had effects similar to BHT, but less potent than α-tocopherol, trolox and BHA. Also, inhibitory effects of spiraeoside were evaluated toward some metabolic enzymes including acetylcholinesterase (AChE), butyrylcholinesterase (BChE), carbonic anhydrase II (CA II) and α-glycosidase, which are related to a number of illnesses, such as Alzheimer's disease (AD), diabetes mellitus and glaucoma disorder. Spiraeoside exhibited IC values of 4.44 nM (r: 0.9610), 7.88 nM (r: 0.9784), 19.42 nM (r: 0.9673) and 29.17 mM (r: 0.9209), respectively against these enzymes. Enzyme inhibition abilities were compared to clinical used inhibitors including acetazolamide (for CA II), tacrine (for AChE and BChE) and acarbose (for α-glycosidase). Spiraeoside demonstrated effective antioxidant, anticholinergic, antidiabetic and antiglaucoma activities. With these properties, it has shown that Spiraeoside has the potential to be a medicine for some metabolic diseases.
PubMed: 37693735
DOI: 10.1016/j.jsps.2023.101760 -
ACS Omega Aug 2023Current flotation practices using lime or cyanide as depressants in chalcopyrite and pyrite separation have significant disadvantages, such as substantial reagent...
Current flotation practices using lime or cyanide as depressants in chalcopyrite and pyrite separation have significant disadvantages, such as substantial reagent consumption, high slurry pH, and environmental hazards. This work aimed to explore the utilization and mechanisms of tannic acid (TA) as an eco-friendly alternative to lime or cyanide in chalcopyrite-pyrite separation. Flotation results showed that TA selectively depressed pyrite yet allowed chalcopyrite to float at neutral or alkaline pH. Adsorption density and zeta potential results indicated that TA adsorbed intensely on pyrite but minorly on chalcopyrite. Besides, potassium ethyl xanthate was still largely adsorbed on chalcopyrite but not on pyrite after TA adsorption. Surface analysis by Fourier transform infrared spectroscopy and X-ray photoelectron spectroscopy further showed that the oxidation species of FeOOH and Fe (SO), particularly FeOOH were the main active sites for TA chemical adsorption. Owing to the greater and faster oxidation of pyrite, more FeOOH and Fe (SO) were generated on the pyrite surface, and the chemical adsorption of TA was more pronounced on the pyrite surface than on the chalcopyrite surface.
PubMed: 37636951
DOI: 10.1021/acsomega.3c03663 -
PloS One 2020This study aims to provide basic data on the types and frequency of chemical ingestions and the clinical outcomes of chemical ingestion injury.
OBJECTIVE
This study aims to provide basic data on the types and frequency of chemical ingestions and the clinical outcomes of chemical ingestion injury.
METHODS
This study retrospectively analyzed the data obtained from the Emergency Department-Based Injury In-depth Surveillance of the Korea Centers for Disease Control and Prevention (South Korea) from 2011 to 2016. Patients ingesting chemicals aged ≥ 18 years were included, but those ingesting unknown chemical substances or with unknown clinical outcomes were excluded.
RESULTS
This study included 2,712 (47.2% were men and 52.8% were women, mean age, 47.05 years) patients ingesting chemicals. Unintentional and intentional ingestions were reported in 1,673 (61.7%) and 1,039 (38.3%), respectively. The most commonly ingested chemical substances were hypochlorites, detergents, ethanol, and acetic acid. In the unintentional ingestion group, the most common chemicals upon admission were hypochlorites (74), glacial acetic acid (60), and detergent (33). The admission rates were 60% for glacial acetic acid, 58.3% ethylene glycol, and 30.4% other alkali agents. In the intentional ingestion group, the most common chemicals upon admission were hypochlorites (242), glacial acetic acid (79), ethylene glycol (42), and detergent (41). The admission rates were 91.9% for glacial acetic acid, 87.5% ethylene glycol, 85.7% potassium cyanide, and 81.4% hydrochloric acid. In total, 79 deaths (10 unintentional ingestions, 69 intentional ingestion) were reported, and glacial acetic acid had an odds ratio of 9.299 for mortality.
CONCLUSION
We compared the intentional and unintentional ingestion groups, and analyzed the factors affecting hospital admission and mortality in each group. The types and clinical outcomes of chemical ingestion varied depending on the purpose of chemical ingestion. The findings are considered beneficial in establishing treatment policies for patients ingesting chemicals.
Topics: Acetic Acid; Adolescent; Adult; Aged; Aged, 80 and over; Antidotes; Detergents; Eating; Emergency Service, Hospital; Ethanol; Ethylene Glycol; Female; Hazardous Substances; Humans; Hypochlorous Acid; Male; Middle Aged; Poison Control Centers; Poisoning; Republic of Korea; Young Adult
PubMed: 32130274
DOI: 10.1371/journal.pone.0229939 -
Journal of Medical Toxicology :... Jul 2021Cyanide is a deadly poison, particularly with oral exposure where larger doses can occur before symptoms develop. Prior studies and multiple governmentagencies highlight...
INTRODUCTION
Cyanide is a deadly poison, particularly with oral exposure where larger doses can occur before symptoms develop. Prior studies and multiple governmentagencies highlight oral cyanide as an agent with the potential for use in a terrorist attack. Currently, there are no FDA approved antidotes specific to oralcyanide. An oral countermeasure that can neutralize and prevent absorption of cyanide from the GI tract after oral exposure is needed. Our objective was toevaluate the efficacy of oral sodium thiosulfate on survival and clinical outcomes in a large, swine model of severe cyanide toxicity.
METHODS
Swine (45-55kg) were instrumented, sedated, and stabilized. Potassium cyanide (8 mg/kg KCN) in saline was delivered as a one-time bolus via an orogastric tube. Three minutes after cyanide, animals randomized to the treatment group received sodium thiosulfate (510 mg/kg, 3.25 M solution) via orogastric tube. Our primary outcome was survival at 60 minutes after exposure. We compared survival between groups by log-rank, Mantel-Cox analysis and trended labs and vital signs.
RESULTS
At baseline and time of treatment all animals had similar weights, vital signs, and laboratory values. Survival at 60 min was 100% in treated animals compared to 0% in the control group (p=0.0027). Animals in the control group became apneic and subsequently died by 35.0 min (20.2,48.5) after cyanide exposure. Mean arterial pressure was significantly higher in the treatment group compared to controls (p=0.008). Blood lactate (p=0.02) and oxygen saturation (p=0.02) were also significantly different between treatment and control groups at study end.
CONCLUSION
Oral administration of sodium thiosulfate improved survival, blood pressure, respirations, and blood lactate concentrations in a large animal model of acute oral cyanide toxicity.
Topics: Administration, Oral; Animals; Antidotes; Cyanides; Humans; Models, Animal; Swine; Thiosulfates; Treatment Outcome
PubMed: 33821433
DOI: 10.1007/s13181-021-00836-5