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Biomolecules Nov 2020With the increase in biotechnological, environmental, and nutraceutical importance of algae, about 100 whole genomic sequences of algae have been published, and this... (Review)
Review
With the increase in biotechnological, environmental, and nutraceutical importance of algae, about 100 whole genomic sequences of algae have been published, and this figure is expected to double in the coming years. The phenotypic and ecological diversity among algae hints at the range of functional capabilities encoded by algal genomes. In order to explore the biodiversity of algae and fully exploit their commercial potential, understanding their evolutionary, structural, functional, and developmental aspects at genomic level is a pre-requisite. So forth, the algal genomic analysis revealed us that algae evolved through endosymbiotic gene transfer, giving rise to around eight phyla. Amongst the diverse algal species, the unicellular green algae has attained the status of model organism as it is an ideal organism to elucidate the biological processes critical to plants and animals, as well as commercialized to produce range of bio-products. For this review, an overview of evolutionary process of algae through endosymbiosis in the light of genomics, as well as the phylogenomic, studies supporting the evolutionary process of algae was reviewed. Algal genomics not only helped us to understand the evolutionary history of algae but also may have an impact on our future by helping to create algae-based products and future biotechnological approaches.
Topics: Chlamydomonas reinhardtii; Evolution, Molecular; Genomics
PubMed: 33172219
DOI: 10.3390/biom10111524 -
Biotechnology Advances 2016Algae and bacteria have coexisted ever since the early stages of evolution. This coevolution has revolutionized life on earth in many aspects. Algae and bacteria... (Review)
Review
Algae and bacteria have coexisted ever since the early stages of evolution. This coevolution has revolutionized life on earth in many aspects. Algae and bacteria together influence ecosystems as varied as deep seas to lichens and represent all conceivable modes of interactions - from mutualism to parasitism. Several studies have shown that algae and bacteria synergistically affect each other's physiology and metabolism, a classic case being algae-roseobacter interaction. These interactions are ubiquitous and define the primary productivity in most ecosystems. In recent years, algae have received much attention for industrial exploitation but their interaction with bacteria is often considered a contamination during commercialization. A few recent studies have shown that bacteria not only enhance algal growth but also help in flocculation, both essential processes in algal biotechnology. Hence, there is a need to understand these interactions from an evolutionary and ecological standpoint, and integrate this understanding for industrial use. Here we reflect on the diversity of such relationships and their associated mechanisms, as well as the habitats that they mutually influence. This review also outlines the role of these interactions in key evolutionary events such as endosymbiosis, besides their ecological role in biogeochemical cycles. Finally, we focus on extending such studies on algal-bacterial interactions to various environmental and bio-technological applications.
Topics: Animals; Anthozoa; Aquaculture; Bacterial Physiological Phenomena; Biodegradation, Environmental; Biological Evolution; Biotechnology; Ecosystem; Host-Parasite Interactions; Lichens; Microalgae; Phaeophyceae; Phytoplankton; Symbiosis
PubMed: 26657897
DOI: 10.1016/j.biotechadv.2015.12.003 -
Chemosphere Oct 2022Acid mine drainage (AMD) is a global issue and causes harmful environmental impacts. AMD has high acidity and contains a high concentration of heavy metals and... (Review)
Review
Acid mine drainage (AMD) is a global issue and causes harmful environmental impacts. AMD has high acidity and contains a high concentration of heavy metals and metalloids, making it toxic to plants, animals, and humans. Traditional treatments for AMD have been widely used for a long time. Nevertheless, some limitations, such as low efficacy and secondary contamination, have led them to be replaced by other methods such as bio-based AMD treatments. This study reviewed three bio-based treatment methods using algae, biochar, and bacteria that can be used separately and potentially in combination for effective and sustainable AMD treatment to identify the removal mechanisms and essential parameters affecting AMD treatment. All bio-based methods, when applied as a single process and in combination (e.g. algae-biochar and algae-bacteria), were identified as effective treatments for AMD. Also, all these bio-based methods were found to be affected by some parameters (e.g. pH, temperature, biomass concentration and initial metal concentration) when removing heavy metals from AMD. However, we did not identify any research focusing on the combination of algae-biochar-bacteria as a consortium for AMD treatment. Therefore, due to the excellent performance in AMD treatment of algae, biochar and bacteria and the potential synergism among them, this review provides new insight and discusses the feasibility of a combination of algae-biochar-bacteria for AMD treatment.
Topics: Acids; Animals; Bacteria; Charcoal; Metals, Heavy; Mining
PubMed: 35691393
DOI: 10.1016/j.chemosphere.2022.135284 -
Ecotoxicology and Environmental Safety Jul 2022Eutrophication in freshwater has become increasingly severe around the world, resulting in phytoplankton overgrowth and benthic algae reduction. Bivalves can change the... (Review)
Review
Eutrophication in freshwater has become increasingly severe around the world, resulting in phytoplankton overgrowth and benthic algae reduction. Bivalves can change the density, dominant species and community structure of phytoplankton, increase available light levels, and provide physical habitats and growth conditions for benthic algae. The nutritional composition, density, community structure, and toxin of algae affect the growth, feeding, digestion, metabolism, immunity of bivalves in return. Interactions of bivalves and algae and effects of environmental factors on these interactions need a synthesis of studies, when using bivalves as a biomanipulation tool to control eutrophication. Whether bivalves can effectively suppress phytoplankton and promote benthic algae is related to the collective filtration and excretion capacity determined by size, species, population densities of bivalves, the quantity and quality of algae, and environmental factors such as temperature, dissolved oxygen, pH, and hydrodynamic. Small scale bivalve biomanipulation experiments are mostly conducted in lakes, urban ponds, and reservoirs with some success, applying in the whole ecosystem should consider more questions such as natural conditions, selection and death or reproduction of bivalves, and ecological disturbances. This review provides new considerations for technical issues such as the sustainable cultivation of bivalves and the implementation of biomanipulation in eutrophic waters.
Topics: Animals; Bivalvia; Chlorophyta; Ecosystem; Eutrophication; Lakes; Phytoplankton
PubMed: 35617904
DOI: 10.1016/j.ecoenv.2022.113665 -
International Journal of Environmental... Jul 2022Shellfish and algae mariculture make up an important part of the marine fishery carbon sink. Carbon sink research is necessary to ensure China achieves its goal of...
Shellfish and algae mariculture make up an important part of the marine fishery carbon sink. Carbon sink research is necessary to ensure China achieves its goal of carbon neutrality. This study used the material quality assessment method to estimate the carbon sink capacity of shellfish and algae. Product value, carbon storage value, and oxygen release value were used to calculate the economic value of shellfish and algae carbon sequestration. The results showed that the annual average shellfish and algae carbon sink in China was 1.10 million tons from 2003 to 2019, of which shellfish accounted for 91.63%, wherein , , and were the main contributors. The annual average economic value of China's shellfish and algae carbon sequestration was USD 71,303.56 million, and the product value was the main contributor, accounting for 99.11%. The carbon sink conversion ratios of shellfish and algae were 8.37% and 5.20%, respectively, thus making shellfish the aquaculture species with the strongest carbon sink capacity and the greatest carbon sink potential. The estimated growth rate in the shellfish and algae removable carbon sink was 33,900 tons/year in China, but this trend was uncertain. The capacity for carbon sequestration and exchange by aquaculture can be improved by expanding breeding space, promoting multi-level comprehensive breeding modes, and marine artificial upwelling projects.
Topics: Carbon; Carbon Dioxide; Carbon Sequestration; China; Shellfish
PubMed: 35886723
DOI: 10.3390/ijerph19148873 -
Life (Basel, Switzerland) Aug 2023Diabetes poses a significant global health challenge, necessitating innovative therapeutic strategies. Natural products and their derivatives have emerged as promising... (Review)
Review
Diabetes poses a significant global health challenge, necessitating innovative therapeutic strategies. Natural products and their derivatives have emerged as promising candidates for diabetes management due to their diverse compositions and pharmacological effects. Algae, in particular, have garnered attention for their potential as a source of bioactive compounds with anti-diabetic properties. This review offers a comprehensive overview of algae-derived natural products for diabetes management, highlighting recent developments and future prospects. It underscores the pivotal role of natural products in diabetes care and delves into the diversity of algae, their bioactive constituents, and underlying mechanisms of efficacy. Noteworthy algal derivatives with substantial potential are briefly elucidated, along with their specific contributions to addressing distinct aspects of diabetes. The challenges and limitations inherent in utilizing algae for therapeutic interventions are examined, accompanied by strategic recommendations for optimizing their effectiveness. By addressing these considerations, this review aims to chart a course for future research in refining algae-based approaches. Leveraging the multifaceted pharmacological activities and chemical components of algae holds significant promise in the pursuit of novel antidiabetic treatments. Through continued research and the fine-tuning of algae-based interventions, the global diabetes burden could be mitigated, ultimately leading to enhanced patient outcomes.
PubMed: 37763235
DOI: 10.3390/life13091831 -
Marine Drugs Feb 2021Historically, algae have stimulated significant economic interest particularly as a source of fertilizers, feeds, foods and pharmaceutical precursors. However, there is... (Review)
Review
Historically, algae have stimulated significant economic interest particularly as a source of fertilizers, feeds, foods and pharmaceutical precursors. However, there is increasing interest in exploiting algal diversity for their antiviral potential. Here, we present an overview of 50-years of scientific and technological developments in the field of algae antivirals. After bibliometric analysis of 999 scientific references, a survey of 16 clinical trials and analysis of 84 patents, it was possible to identify the dominant algae, molecules and viruses that have been shaping and driving this promising field of research. A description of the most promising discoveries is presented according to molecule class. We observed a diverse range of algae and respective molecules displaying significant antiviral effects against an equally diverse range of viruses. Some natural algae molecules, like carrageenan, cyanovirin or griffithsin, are now considered prime reference molecules for their outstanding antiviral capacity. Crucially, while many algae antiviral applications have already reached successful commercialization, the large spectrum of algae antiviral capacities already identified suggests a strong potential for future expansion of this field.
Topics: Agriculture; Antiviral Agents; Aquaculture; Bacterial Proteins; Clinical Trials as Topic; Diterpenes; Lectins; Membrane Proteins; Microalgae; Plant Lectins; Polysaccharides; Seaweed
PubMed: 33562153
DOI: 10.3390/md19020094 -
Polymers Feb 2019Xylans with a variety of structures have been characterised in green algae, including chlorophytes (Chlorophyta) and charophytes (in the Streptophyta), and red algae... (Review)
Review
Xylans with a variety of structures have been characterised in green algae, including chlorophytes (Chlorophyta) and charophytes (in the Streptophyta), and red algae (Rhodophyta). Substituted 1,4-β-d-xylans, similar to those in land plants (embryophytes), occur in the cell wall matrix of advanced orders of charophyte green algae. Small proportions of 1,4-β-d-xylans have also been found in the cell walls of some chlorophyte green algae and red algae but have not been well characterised. 1,3-β-d-Xylans occur as triple helices in microfibrils in the cell walls of chlorophyte algae in the order Bryopsidales and of red algae in the order Bangiales. 1,3;1,4-β-d-Xylans occur in the cell wall matrix of red algae in the orders Palmariales and Nemaliales. In the angiosperm , the gene encodes a xylan 1,4-β-d-xylosyltranferase (xylan synthase), and, when heterologously expressed, this protein catalysed the production of the backbone of 1,4-β-d-xylans. An orthologous gene from the charophyte green alga , when heterologously expressed, produced a similar protein that was also able to catalyse the production of the backbone of 1,4-β-d-xylans. Indeed, it is considered that land plant xylans evolved from xylans in ancestral charophyte green algae. However, nothing is known about the biosynthesis of the different xylans found in chlorophyte green algae and red algae. There is, thus, an urgent need to identify the genes and enzymes involved.
PubMed: 30960338
DOI: 10.3390/polym11020354 -
Journal of Applied Phycology 2018Lectins are unique proteins or glycoproteins of non-immune origin that bind specifically to carbohydrates. They recognise and interact reversibly to either free... (Review)
Review
Lectins are unique proteins or glycoproteins of non-immune origin that bind specifically to carbohydrates. They recognise and interact reversibly to either free carbohydrates or glycoconjugates, without modifying their structure. Lectins are highly diverse and widely distributed in nature and have been extensively reported from various red algae species. Numerous red algae species have been reported to possess lectins having carbohydrate specificity towards complex glycoproteins or high-mannose -glycans. These lectin-glycan interactions further trigger many biochemical responses which lead to their extensive use as valuable tools in biomedical research. Thus, owing to their exceptional glycan recognition property, red algae lectins are potential candidate for inhibition of various viral diseases. Hence, the present report integrates existing information on the red algae lectins, their carbohydrate specificity, and characteristics of purified lectins. Further, the review also reports the current state of research into their anti-viral activity against various enveloped viruses such as HIV, hepatitis, influenza, encephalitis, coronavirus and herpes simplex virus and other biomedical activities such as anti-cancer, anti-microbial, anti-inflammatory, anti-nociceptive and acaricidal activities.
PubMed: 32214665
DOI: 10.1007/s10811-017-1338-5 -
Plants (Basel, Switzerland) Nov 2021Algae and fungi share a rich history in the fields of basic and applied natural science. In biotechnology, in particular, algae and fungi are of paramount importance,... (Review)
Review
Algae and fungi share a rich history in the fields of basic and applied natural science. In biotechnology, in particular, algae and fungi are of paramount importance, due to the production and development of valuable compounds, such as pharmaceuticals, enzymes, and biofuels. They are also used in waste fermentation, biocontrol of pathogens, and food processing and improvement, among other fields. Although a substantial number of different microorganisms are utilized for these purposes, there lies tremendous potential in uncharacterized microbial species. For this reason, biodiversity hotspots offer a wealth of potential in the discovery of new products and processing strategies based on these microorganisms. This review presents an overview of the use of algae and fungi in pre-Hispanic times/modern-day Mexico for the benefits of mankind. One of our objectives is to raise awareness about the potential of developing research projects for identification and biotechnological utilization of algae and fungi in a megadiverse country, such as Mexico.
PubMed: 34834893
DOI: 10.3390/plants10112530