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Animal : An International Journal of... Jun 2017Free-range laying hen systems are increasing within Australia and research is needed to determine optimal outdoor stocking densities. Six small (n=150 hens) experimental...
Free-range laying hen systems are increasing within Australia and research is needed to determine optimal outdoor stocking densities. Six small (n=150 hens) experimental flocks of ISA Brown laying hens were housed with access to ranges simulating one of three outdoor stocking densities with two pen replicates per density: 2000 hens/ha, 10 000 hens/ha or 20 000 hens/ha. Birds were provided daily range access from 21 to 36 weeks of age and the range usage of 50% of hens was tracked using radio-frequency identification technology. Throughout the study, basic external health assessments following a modified version of the Welfare Quality® protocol showed most birds were in visibly good condition (although keel damage was increasingly present with age) with few differences between stocking densities. Toenail length at 36 weeks of age was negatively correlated with hours spent ranging for all pens of birds (all r⩾-0.23, P⩽0.04). At 23 weeks of age, there were no differences between outdoor stocking densities in albumen corticosterone concentrations (P=0.44). At 35 weeks of age, density effects were significant (P<0.001) where the eggs from hens in the highest outdoor stocking density showed the highest albumen corticosterone concentrations, although eggs from hens in the 10 000 hens/ha density showed the lowest concentrations (P<0.017). Behavioural observations of hens both on the range and indoors showed more dust bathing and foraging (scratching followed by ground-pecking) was performed outdoors, but more resting indoors (all P<0.001). Hens from the 2000 hens/ha densities showed the least foraging on the range but the most resting outdoors, with hens from the 20 000 hens/ha densities showing the least amount of resting outdoors (all P<0.017). Proportions of dust bathing outdoors tended to differ between the stocking densities (P=0.08). For each of the health and behavioural measures there were differences between pen replicates within stocking densities. These data show outdoor stocking density has some effects on hen welfare, and it appears that consideration of both individual and group-level behaviour is necessary when developing optimal stocking density guidelines and free-range system management practices.
Topics: Animal Husbandry; Animal Welfare; Animals; Australia; Behavior, Animal; Chickens; Corticosterone; Female; Housing, Animal; Ovum; Population Density
PubMed: 27821220
DOI: 10.1017/S1751731116002342 -
Information and Inference : a Journal... Jun 2022Estimation of density functions supported on general domains arises when the data are naturally restricted to a proper subset of the real space. This problem is...
Estimation of density functions supported on general domains arises when the data are naturally restricted to a proper subset of the real space. This problem is complicated by typically intractable normalizing constants. Score matching provides a powerful tool for estimating densities with such intractable normalizing constants but as originally proposed is limited to densities on [Formula: see text] and [Formula: see text]. In this paper, we offer a natural generalization of score matching that accommodates densities supported on a very general class of domains. We apply the framework to truncated graphical and pairwise interaction models and provide theoretical guarantees for the resulting estimators. We also generalize a recently proposed method from bounded to unbounded domains and empirically demonstrate the advantages of our method.
PubMed: 35721800
DOI: 10.1093/imaiai/iaaa041 -
EcoHealth Jun 2022Public health risks associated with the intensification of dairy farming are an emerging concern. Dairy cattle are a reservoir for a number of pathogens that can cause...
Public health risks associated with the intensification of dairy farming are an emerging concern. Dairy cattle are a reservoir for a number of pathogens that can cause human illness. This study examined the spatial distribution of dairy cattle density and explored temporal patterns of human campylobacteriosis and cryptosporidiosis notifications in New Zealand from 1997 to 2015. Maps of dairy cattle density were produced, and temporal patterns of disease rates were assessed for urban versus rural areas and for areas with different dairy cattle densities using descriptive temporal analyses. Campylobacteriosis and cryptosporidiosis rates displayed strong seasonal patterns, with highest rates in spring in rural areas and, for campylobacteriosis, summer in urban areas. Increases in rural cases often preceded increases in urban cases. Furthermore, disease rates in areas with higher dairy cattle densities tended to peak before areas with low densities or no dairy cattle. Infected dairy calves may be a direct or indirect source of campylobacteriosis or cryptosporidiosis infection in humans through environmental or occupational exposure routes, including contact with animals or feces, recreational contact with contaminated waterways, and consumption of untreated drinking water. These results have public health implications for populations living, working, or recreating in proximity to dairy farms.
Topics: Animals; Campylobacter Infections; Cattle; Cattle Diseases; Cryptosporidiosis; Farms; Feces; Humans; New Zealand
PubMed: 35689151
DOI: 10.1007/s10393-022-01593-9 -
Microbial Cell Factories Dec 2021The characterization of colonization and dynamic changes related to gut microorganisms might be vital, as it presents an opportunity to quantify the co-variation between...
BACKGROUND
The characterization of colonization and dynamic changes related to gut microorganisms might be vital, as it presents an opportunity to quantify the co-variation between stocking densities and gut microbiome of dynamic distribution. The objective of this study was to determine the stocking density on physiological performance and dynamic distribution of gut microbiome (including bacterial and fungal communities) of Langya laying hens in the two development stages.
METHODS
A randomized design with 2 × 3 factorial controls consisting of two development stages (24, 43 weeks-old) with three different stocking densities was performed. Three different stocking densities were allocated to a total of 300 11-week-old Langya laying hens (450 cm/bird, 675 cm/bird, 900 cm/bird). Three housing densities were accomplished by raising different chickens per cage with the same floor size. The dependent variables of stocking densities at each sampling point were; growth performance, organs index, egg quality and the changes of dynamic gut bacterial and fungal communities in the cecum.
RESULTS
Results showed that the stocking density didn't affect liver index, eggshell thickness, breaking shell strength and egg shape index. Hens from the highest stocking density had the lowest body weight, fallopian tube index, egg weight and yolk colour score. Except for the yolk colour score, the measurement changes caused by age followed the opposite pattern as stocking density. We observed a substantial rise in taxa linked with health threats when stocking density was increased, including Talaromyces, Oscillospiraceae_UCG-002, Oscillospira, and Dielma. The opposite was observed with Bacteroides, Bifidobacterium, Lachnoclostridium, Eisenbergiella, and Kurtzmaniella. Also, most taxa were linked to polymicrobial infection in clinical cases, especially species whose percentage declined as the hens aged, such as Terrisporobacter, Faecalicoccus, Dialister, Cylindrocarpon etc. Whereas Sellimonas, Mitsuokella, Eurotium, Wardomyces and Cephalotheca had the opposite trend.
CONCLUSION
We speculated that excessive high density drove the abundance of bacteria and fungi connected with health problems. Where the gut microecology gradually reach a mature and balance status with age. Overall, this study demonstrates gut microbiome ecological processes in Langya layers at various stocking densities and finds possible connections between stocking density, microbiome and production performance. Our study will contribute to new insights associating suitable density patterns and production performance in laying hens by harnessing such a relative microbiome.
Topics: Age Factors; Animal Husbandry; Animals; Bacteria; Chickens; Female; Fungi; Gastrointestinal Microbiome; Housing, Animal; Mycobiome
PubMed: 34863176
DOI: 10.1186/s12934-021-01707-y -
Ecology and Evolution Oct 2023The western honey bee, , lives worldwide in approximately 102 million managed hives but also wild throughout much of its native and introduced range. Despite the... (Review)
Review
The western honey bee, , lives worldwide in approximately 102 million managed hives but also wild throughout much of its native and introduced range. Despite the global importance of as a crop pollinator, wild colonies have received comparatively little attention in the scientific literature and basic information regarding their density and abundance is scattered. Here, we review 40 studies that have quantified wild colony density directly ( = 33) or indirectly using genetic markers ( = 7) and analyse data from 41 locations worldwide to identify factors that influence wild colony density. We also compare the density of wild and managed colonies at a regional scale using data on managed colonies from the Food and Agriculture Organization (FAO). Wild colony densities varied from 0.1 to 24.2/km and were significantly lower in Europe (average of 0.26/km) than in Northern America (1.4/km), Oceania (4.4/km), Latin America (6.7/km) and Africa (6.8/km). Regional differences were not significant after controlling for both temperature and survey area, suggesting that cooler climates and larger survey areas may be responsible for the low densities reported in Europe. Managed colony densities were 2.2/km in Asia, 1.2/km in Europe, 0.2/km, in Northern America, 0.2/km in Oceania, 0.5/km in Latin America and 1/km in Africa. Wild colony densities exceeded those of managed colonies in all regions except Europe and Asia. Overall, there were estimated to be between two and three times as many wild colonies as managed worldwide. More wild colony surveys, particularly in Asia and South America, are needed to assess the relative density of wild and managed colonies at smaller spatial scales.
PubMed: 37841222
DOI: 10.1002/ece3.10609 -
Insects Dec 2022Population density can affect survival, growth, development time, and adult size and fecundity, which are collectively known as density-dependent effects. Container...
Population density can affect survival, growth, development time, and adult size and fecundity, which are collectively known as density-dependent effects. Container larvae often attain high densities in nature, and those densities may be reduced when larval control is applied. We tested the hypothesis that density-dependent effects on survival are common and strong in nature and could result in maximal adult production at intermediate densities for , , and . We surveyed naturally occurring densities in field containers, then introduced larvae at a similar range of densities, and censused the containers for survivors. We analyzed the survival-density relationships by nonlinear regressions, which showed that survival-density relationships vary among seasons, sites, and species. For each species, some sites and times yielded predictions that larval density reduction would yield the same (compensation), or more (overcompensation), adults than no larval density reduction. Thus, larval control targeting these species cannot always be assumed to yield a reduction in the number of adult mosquitoes. We suggest that mosquito control targeting larvae may be made more effective by: Imposing maximum mortality; targeting populations when larval abundances are low; and knowing the shape of the survival-density response of the target population.
PubMed: 36661946
DOI: 10.3390/insects14010017 -
Ecology Nov 2022Total biomass production of plant monocultures growing over a range of densities and harvested after a period of growth increases monotonically with density and then...
Total biomass production of plant monocultures growing over a range of densities and harvested after a period of growth increases monotonically with density and then levels out at higher densities. This pattern is called constant final yield (CFY) and is considered one of the most general phenomena in plant ecology. If CFY applies to plant communities, it would be a key to understanding and predicting many community-level phenomena. We tested two primary hypotheses experimentally: (1) Mixtures of several species show CFY. (2) If so, the proportion of biomass production by the component species in a mixture does not change at densities above the density that reaches CFY. We performed a series of glasshouse experiments over 3 years using a "community density series," in which the overall density of five species was varied while their proportions remained unchanged. In the first experiment, we grew a mixture of annual and perennial herbaceous species in mesocosms, and all species were also grown in monocultures at the corresponding densities. A similar experiment was performed in the second and third years, but only with annuals. A third experiment with mixtures only was performed in pots over 2 years. In all cases, aboveground biomass was harvested, separated by species, dried, and weighed. Perennials with underground storage organs produced maximum aboveground biomass at low or intermediate densities. In the second experiment, two of the species produced maximum biomass at the second-highest density in monoculture, while mixtures of all five species showed classical CFY behavior, and the contribution of the species to the mixture changed very little above the lowest density producing CFY. The results of the third experiment were also consistent with the hypotheses. In conclusion, CFY in aboveground biomass production was observed in communities of annual species, and the contribution of the individual species was relatively insensitive to an increase in density above that reaching CFY, i.e., competitive performance of the species changed with density until CFY was reached. Evidence for CFY was stronger in mixture than in monoculture. Coexistence theory must include density as well as frequency dependence if densities are below CFY.
Topics: Biodiversity; Biomass; Plants; Species Specificity; Population Density; Plant Physiological Phenomena
PubMed: 35796439
DOI: 10.1002/ecy.3802 -
Ecology and Evolution Mar 2020Environmental change and habitat fragmentation will affect population densities for many species. For those species that have locally adapted to persist in changed or...
Environmental change and habitat fragmentation will affect population densities for many species. For those species that have locally adapted to persist in changed or stressful habitats, it is uncertain how density dependence will affect adaptive responses. Anurans (frogs and toads) are typically freshwater organisms, but some coastal populations of green treefrogs () have adapted to brackish, coastal wetlands. Tadpoles from coastal populations metamorphose sooner and demonstrate faster growth rates than inland populations when reared solitarily. Although saltwater exposure has adaptively reduced the duration of the larval period for coastal populations, increases in densities during larval development typically increase time to metamorphosis and reduce rates of growth and survival. We test how combined stressors of density and salinity affect larval development between salt-adapted ("coastal") and nonsalt-adapted ("inland") populations by measuring various developmental and metamorphic phenotypes. We found that increased tadpole density strongly affected coastal and inland tadpole populations similarly. In high-density treatments, both coastal and inland populations had reduced growth rates, greater exponential decay of growth, a smaller size at metamorphosis, took longer to reach metamorphosis, and had lower survivorship at metamorphosis. Salinity only exaggerated the effects of density on the time to reach metamorphosis and exponential decay of growth. Location of origin affected length at metamorphosis, with coastal tadpoles metamorphosing slightly longer than inland tadpoles across densities and salinities. These findings confirm that density has a strong and central influence on larval development even across divergent populations and habitat types and may mitigate the expression (and therefore detection) of locally adapted phenotypes.
PubMed: 32184991
DOI: 10.1002/ece3.6069 -
Ecology and Evolution Jul 2022Theoretical modeling predicts that both direct and delayed density-dependence are key factors to generate population cycles. Deciphering density-dependent processes that...
Theoretical modeling predicts that both direct and delayed density-dependence are key factors to generate population cycles. Deciphering density-dependent processes that lead to variable population growth characterizing different phases of the cycles remains challenging. This is particularly the case for the period of prolonged low densities, which is inherently data deficient. However, demographic analyses based on long-term capture-mark-recapture datasets can help resolve this question. We relied on a 16-year (2004-2019) live-trapping program to analyze the summer demography and movements of a cyclic brown lemming population in the Canadian Arctic. More specifically, we examined if inversely density-dependent processes could explain why population growth can remain low during the prolonged low phase. We found that the proportion of females in the population was inversely density-dependent with a strong male-biased sex ratio at low densities but not at high densities. However, survival of adult females was higher than adult males, but both had lower survival at low densities than at high ones. Distances moved by both adult males and females were density-dependent, and proportion of females in reproductive condition was weakly density-dependent as it tended to increase at low density. Individual body condition, measured as monthly change in body mass, was not density-dependent. Overall, the strong male-biased sex ratio at very low densities suggests a loss of reproductive potential due to the rarity of females and appears to be the most susceptible demographic factor that could contribute to the prolonged low phase in cyclic brown lemmings. What leads to this sex-bias in the first place is still unclear, potentially owing to our trapping period limited to the summer, but we suggest that it could be due to high predation rate on breeding females in winter.
PubMed: 35813905
DOI: 10.1002/ece3.9055 -
Frontiers in Plant Science 2021Adjusting planting density is a common agricultural practice used to achieve maximum yields. However, whether the quality of medicinal herbs can be improved by...
Adjusting planting density is a common agricultural practice used to achieve maximum yields. However, whether the quality of medicinal herbs can be improved by implementing appropriate planting densities is still uncertain. The medicinal crop was used to analyze the effects of planting density on growth and ginsenoside accumulation, and the possible mechanisms of these effects were revealed through metabonomics. The results showed that achieved high ginsenoside accumulation at high planting densities (8 × 8 and 10 × 10 cm), while simultaneously achieved high biomass and ginsenoside accumulation at moderate planting density of 15 × 15 cm. At the moderate planting density, the primary metabolism (starch and sucrose metabolism) and secondary metabolism (the biosynthesis of phytohormone IAA and ginsenoside) of the plants were significantly enhanced. However, the strong intraspecific competition at the high planting densities resulted in stress as well as the accumulation of phytohormones (SA and JA), antioxidants (gentiobiose, oxalic acid, dehydroascorbic acid) and other stress resistance-related metabolites. Interestingly, the dry biomass and ginsenoside content were significantly lower at low densities (20 × 20 and 30 × 30 cm) with low intraspecific competition, which disturbed normal carbohydrate metabolism by upregulating galactose metabolism. In summary, an appropriate planting density was benefit for the growth and accumulation of ginsenosides in by balancing primary metabolism and secondary metabolism.
PubMed: 33936125
DOI: 10.3389/fpls.2021.628294