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Journal of the American Chemical Society Nov 2023Programmable biomolecule-mediated computing is a new computing paradigm as compared to contemporary electronic computing. It employs nucleic acids and analogous... (Review)
Review
Programmable biomolecule-mediated computing is a new computing paradigm as compared to contemporary electronic computing. It employs nucleic acids and analogous biomolecular structures as information-storing and -processing substrates to tackle computational problems. It is of great significance to investigate the various issues of programmable biomolecule-mediated processors that are capable of automatically processing, storing, and displaying information. This Perspective provides several conceptual designs of programmable biomolecule-mediated processors and provides some insights into potential future research directions for programmable biomolecule-mediated processors.
PubMed: 37864571
DOI: 10.1021/jacs.3c04142 -
Seminars in Hearing May 2021This case study examines the methods used to troubleshoot a cochlear implant processor via video visit with a nonagenarian (90+ years old) with a bimodal cochlear... (Review)
Review
This case study examines the methods used to troubleshoot a cochlear implant processor via video visit with a nonagenarian (90+ years old) with a bimodal cochlear implant system. This article will discuss the evaluation and management as well as which specific issues could be addressed virtually and how they were resolved. Examples will be provided about how to virtually connect with the patient and how to best facilitate communication during a video visit. Additionally, this article will examine the captioning apps and other hearing assistive technology available for smartphones that can provide further assistance during a cell phone call along with their benefits and limitations.
PubMed: 34381294
DOI: 10.1055/s-0041-1731691 -
Philosophical Transactions. Series A,... Oct 2017There is a broad design space for concurrent computer processors: they can be optimized for low power, low latency or high throughput. This freedom to tune each...
There is a broad design space for concurrent computer processors: they can be optimized for low power, low latency or high throughput. This freedom to tune each processor design to its niche has led to an increasing diversity of machines, from powerful pocketable devices to those responsible for complex and critical tasks, such as car guidance systems. Given this context, academic concurrency research sounds notes of both caution and optimism. Caution because recent work has uncovered flaws in the way we explain the subtle memory behaviour of concurrent systems: specifications have been shown to be incorrect, leading to bugs throughout the many layers of the system. And optimism because our tools and methods for verifying the correctness of concurrent code-although built above an idealized model of concurrency-are becoming more mature. This paper looks at the way we specify the memory behaviour of concurrent systems and suggests a new direction. Currently, there is a siloed approach, with each processor and programming language specified separately in an incomparable way. But this does not match the structure of our programs, which may use multiple processors and languages together. Instead we propose a approach, where program components carry with them a description of the sort of concurrency they rely on, and there is a mechanism for composing these. This will support not only components written for the multiple varied processors found in a modern system but also those that use idealized models of concurrency, providing a sound footing for mature verification techniques.This article is part of the themed issue 'Verified trustworthy software systems'.
PubMed: 28871054
DOI: 10.1098/rsta.2015.0406 -
Ear and HearingBilateral cochlear implant (BiCI) listeners use independent processors in each ear. This independence and lack of shared hardware prevents control of the timing of...
The Impact of Synchronized Cochlear Implant Sampling and Stimulation on Free-Field Spatial Hearing Outcomes: Comparing the ciPDA Research Processor to Clinical Processors.
OBJECTIVES
Bilateral cochlear implant (BiCI) listeners use independent processors in each ear. This independence and lack of shared hardware prevents control of the timing of sampling and stimulation across ears, which precludes the development of bilaterally-coordinated signal processing strategies. As a result, these devices potentially reduce access to binaural cues and introduce disruptive artifacts. For example, measurements from two clinical processors demonstrate that independently-running processors introduce interaural incoherence. These issues are typically avoided in the laboratory by using research processors with bilaterally-synchronized hardware. However, these research processors do not typically run in real-time and are difficult to take out into the real-world due to their benchtop nature. Hence, the question of whether just applying hardware synchronization to reduce bilateral stimulation artifacts (and thereby potentially improve functional spatial hearing performance) has been difficult to answer. The CI personal digital assistant (ciPDA) research processor, which uses one clock to drive two processors, presented an opportunity to examine whether synchronization of hardware can have an impact on spatial hearing performance.
DESIGN
Free-field sound localization and spatial release from masking (SRM) were assessed in 10 BiCI listeners using both their clinical processors and the synchronized ciPDA processor. For sound localization, localization accuracy was compared within-subject for the two processor types. For SRM, speech reception thresholds were compared for spatially separated and co-located configurations, and the amount of unmasking was compared for synchronized and unsynchronized hardware. There were no deliberate changes of the sound processing strategy on the ciPDA to restore or improve binaural cues.
RESULTS
There was no significant difference in localization accuracy between unsynchronized and synchronized hardware (p = 0.62). Speech reception thresholds were higher with the ciPDA. In addition, although five of eight participants demonstrated improved SRM with synchronized hardware, there was no significant difference in the amount of unmasking due to spatial separation between synchronized and unsynchronized hardware (p = 0.21).
CONCLUSIONS
Using processors with synchronized hardware did not yield an improvement in sound localization or SRM for all individuals, suggesting that mere synchronization of hardware is not sufficient for improving spatial hearing outcomes. Further work is needed to improve sound coding strategies to facilitate access to spatial hearing cues. This study provides a benchmark for spatial hearing performance with real-time, bilaterally-synchronized research processors.
Topics: Cochlear Implantation; Cochlear Implants; Computers, Handheld; Hearing; Humans; Sound Localization; Speech Perception
PubMed: 34882619
DOI: 10.1097/AUD.0000000000001179 -
Sensors (Basel, Switzerland) Dec 2021The leakage of hazardous gases and chemical vapors is considered one of the dangerous accidents that can occur in laboratories, workshops, warehouses, and industrial... (Review)
Review
The leakage of hazardous gases and chemical vapors is considered one of the dangerous accidents that can occur in laboratories, workshops, warehouses, and industrial sites that use or store these substances. The early detection and alarming of hazardous gases and volatile chemicals are significant to keep the safety conditions for the people and life forms who are work in and live around these places. In this paper, we investigate the available mobile detection and alarming systems for toxic, hazardous gases and volatile chemicals, especially in the laboratory environment. We included papers from January 2010 to August 2021 which may have the newest used sensors technologies and system components. We identified (236) papers from Clarivate Web of Science (WoS), IEEE, ACM Library, Scopus, and PubMed. Paper selection has been done based on a fast screening of the title and abstract, then a full-text reading was applied to filter the selected papers that resulted in (42) eligible papers. The main goal of this work is to discuss the available mobile hazardous gas detection and alarming systems based on several technical details such as the used gas detection technology (simple element, integrated, smart, etc.), sensor manufacturing technology (catalytic bead, MEMS, MOX, etc.) the sensor specifications (warm-up time, lifetime, response time, precision, etc.), processor type (microprocessor, microcontroller, PLC, etc.), and type of the used communication technology (Bluetooth/BLE, Wi-Fi/RF, ZigBee/XBee, LoRa, etc.). In this review, attention will be focused on the improvement of the detection and alarming system of hazardous gases with the latest invention in sensors, processors, communication, and battery technologies.
Topics: Gases; Humans; Laboratories
PubMed: 34884132
DOI: 10.3390/s21238128 -
Advanced Science (Weinheim,... Mar 2024Soft metamaterials have attracted extensive attention due to their remarkable properties. These materials hold the potential to program and control the morphing behavior...
Soft metamaterials have attracted extensive attention due to their remarkable properties. These materials hold the potential to program and control the morphing behavior of soft machines, however, their combination is limited by the poor reprogrammability of metamaterials and incompatible communication between them. Here, printable and recyclable soft metamaterials possessing reprogrammable embedded intelligence to regulate the morphing of soft machines are introduced. These metamaterials are constructed from interconnected and periodically arranged logic unit cells that are able to perform compound logic operations coupling multiplication and negation. The scalable computation capacity of the unit cell empowers it to simultaneously process multiple fluidic signals with different types and magnitudes, thereby allowing the execution of sophisticated and high-level control operations. By establishing the laws of physical Boolean algebra and formulating a universal design route, soft metamaterials capable of diverse logic operations can be readily created and reprogrammed. Besides, the metamaterials' potential of directly serving as fluidic processors for soft machines is validated by constructing a soft latched demultiplexer, soft controllers capable of universal and customizable morphing programming, and a reprogrammable processor without reconnection. This work provides a facile way to create reprogrammable soft fluidic control systems to meet on-demand requirements in dynamic situations.
PubMed: 38161221
DOI: 10.1002/advs.202305501 -
Asian Pacific Journal of Cancer... Oct 2021Liquid-based preparation (LBP) cytology is commonly used in most laboratories these days due to its convenience and reliable results for the cervical cancer screening...
UNLABELLED
Liquid-based preparation (LBP) cytology is commonly used in most laboratories these days due to its convenience and reliable results for the cervical cancer screening program. The PathTezt™ Liquid-based Pap smear is a second-generation LBP, which uses a filter-based concentration technique in processing the sample.
OBJECTIVE
This study was done to evaluate the cellular fixation, morphology, quality of smear in gynae cytology, and diagnostic interpretation of cervical cytological smears produced by the PathTezt liquid-based processor.
MATERIALS AND METHODS
A total of 400 pap smear samples were taken and processed using the PathTezt 2000 processor. The slides were evaluated in terms of sample adequacy, percentage of the circle covered by epithelial cells, cellular distribution, obscuring factors, and cell fixation.
RESULTS
About 95.25% (381) of the samples were satisfactory for the evaluation. In 19 (4.75%) of the samples, epithelial cells covered less than 50% of the circle. A sample with good cellular distribution was seen in 92% of the cases, while 354 (88.5%) samples showed minimal inflammatory background. Almost all the smears (95.75%) had no erythrocytes in the background. All smears showed good quality fixation features toward nuclear, cytoplasm, and microorganisms. The total performance rate was 99%.
CONCLUSION
Although the PathTezt liquid-based processor is still new compared to other first-generation LBP, the smears produced by this method were of high quality and it was cost-effective.
Topics: Adult; Aged; Cervix Uteri; Cost-Benefit Analysis; Epithelial Cells; Female; Humans; Malaysia; Middle Aged; Papanicolaou Test; Uterine Cervical Neoplasms; Vaginal Smears; Young Adult
PubMed: 34711003
DOI: 10.31557/APJCP.2021.22.10.3261 -
PloS One 2021Gordon Moore famously observed that the number of transistors in state-of-the-art integrated circuits (units per chip) increases exponentially, doubling every 12-24...
Gordon Moore famously observed that the number of transistors in state-of-the-art integrated circuits (units per chip) increases exponentially, doubling every 12-24 months. Analysts have debated whether simple exponential growth describes the dynamics of computer processor evolution. We note that the increase encompasses two related phenomena, integration of larger numbers of transistors and transistor miniaturization. Growth in the number of transistors per unit area, or chip density, allows examination of the evolution with a single measure. Density of Intel processors between 1959 and 2013 are consistent with a biphasic sigmoidal curve with characteristic times of 9.5 years. During each stage, transistor density increased at least tenfold within approximately six years, followed by at least three years with negligible growth rates. The six waves of transistor density increase account for and give insight into the underlying processes driving advances in processor manufacturing and point to future limits that might be overcome.
Topics: Electronics; Humans; Miniaturization; Transistors, Electronic
PubMed: 34407116
DOI: 10.1371/journal.pone.0256245 -
Biomedical Engineering Letters May 2022Conventional spike sorting and motor intention decoding algorithms are mostly implemented on an external computing device, such as a personal computer. The innovation of...
Conventional spike sorting and motor intention decoding algorithms are mostly implemented on an external computing device, such as a personal computer. The innovation of high-resolution and high-density electrodes to record the brain's activity at the single neuron level may eliminate the need for spike sorting altogether while potentially enabling in vivo neural decoding. This article explores the feasibility and efficient realization of in vivo decoding, with and without spike sorting. The efficiency of neural network-based models for reliable motor decoding is presented and the performance of candidate neural decoding schemes on sorted single-unit activity and unsorted multi-unit activity are evaluated. A programmable processor with a custom instruction set architecture, for the first time to the best of our knowledge, is designed and implemented for executing neural network operations in a standard 180-nm CMOS process. The processor's layout is estimated to occupy 49 mm of silicon area and to dissipate 12 mW of power from a 1.8 V supply, which is within the tissue-safe operation of the brain.
PubMed: 35529345
DOI: 10.1007/s13534-022-00217-z -
Nature Communications Dec 2022Tensor analytics lays the mathematical basis for the prosperous promotion of multiway signal processing. To increase computing throughput, mainstream processors...
Tensor analytics lays the mathematical basis for the prosperous promotion of multiway signal processing. To increase computing throughput, mainstream processors transform tensor convolutions into matrix multiplications to enhance the parallelism of computing. However, such order-reducing transformation produces data duplicates and consumes additional memory. Here, we propose an integrated photonic tensor flow processor (PTFP) without digitally duplicating the input data. It outputs the convolved tensor as the input tensor 'flows' through the processor. The hybrid manipulation of optical wavelengths, space dimensions, and time delay steps, enables the direct representation and processing of high-order tensors in the optical domain. In the proof-of-concept experiment, an integrated processor manipulating wavelengths and delay steps is implemented for demonstrating the key functionalities of PTFP. The multi-channel images and videos are processed at the modulation rate of 20 Gbaud. A convolutional neural network for video action recognition is demonstrated on the processor, which achieves an accuracy of 97.9%.
PubMed: 36577748
DOI: 10.1038/s41467-022-35723-2